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Chlorine in PDB 6zt8: X-Ray Structure of Mutated Arabinofuranosidase

Enzymatic activity of X-Ray Structure of Mutated Arabinofuranosidase

All present enzymatic activity of X-Ray Structure of Mutated Arabinofuranosidase:
3.2.1.55;

Protein crystallography data

The structure of X-Ray Structure of Mutated Arabinofuranosidase, PDB code: 6zt8 was solved by T.Tandrup, L.Lo Leggio, J.Zhao, B.Bissaro, S.Barbe, I.Andre, C.Dumon, M.J.O'donohue, R.Faure, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.00 / 2.80
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 156.63, 156.63, 376.32, 90, 90, 120
R / Rfree (%) 20.9 / 24.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of Mutated Arabinofuranosidase (pdb code 6zt8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the X-Ray Structure of Mutated Arabinofuranosidase, PDB code: 6zt8:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 6zt8

Go back to Chlorine Binding Sites List in 6zt8
Chlorine binding site 1 out of 3 in the X-Ray Structure of Mutated Arabinofuranosidase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of Mutated Arabinofuranosidase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl503

b:55.0
occ:1.00
OD1 A:ASN19 3.8 56.5 1.0
OD1 A:ASP380 3.8 45.6 1.0
OD2 A:ASP380 4.0 57.4 1.0
CG A:ASN19 4.3 52.6 1.0
CG A:ASP380 4.3 49.1 1.0
ND2 A:ASN19 4.4 63.1 1.0
CG A:ARG20 4.8 51.9 1.0

Chlorine binding site 2 out of 3 in 6zt8

Go back to Chlorine Binding Sites List in 6zt8
Chlorine binding site 2 out of 3 in the X-Ray Structure of Mutated Arabinofuranosidase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of X-Ray Structure of Mutated Arabinofuranosidase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl504

b:53.1
occ:1.00
OD1 B:ASP380 3.8 54.7 1.0
OD1 B:ASN19 4.0 54.1 1.0
OD2 B:ASP380 4.0 51.0 1.0
ND2 B:ASN19 4.1 50.3 1.0
CG B:ASN19 4.3 47.9 1.0
CG B:ASP380 4.3 50.4 1.0
CG B:ARG20 4.8 48.2 1.0

Chlorine binding site 3 out of 3 in 6zt8

Go back to Chlorine Binding Sites List in 6zt8
Chlorine binding site 3 out of 3 in the X-Ray Structure of Mutated Arabinofuranosidase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of X-Ray Structure of Mutated Arabinofuranosidase within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl503

b:54.5
occ:1.00
OD1 C:ASN19 3.6 48.4 1.0
OD1 C:ASP380 3.6 57.6 1.0
ND2 C:ASN19 3.6 49.5 1.0
OD2 C:ASP380 3.7 56.9 1.0
CG C:ASN19 3.9 43.8 1.0
CG C:ASP380 4.1 54.8 1.0
CG C:ARG20 4.3 45.6 1.0
CD C:ARG20 4.8 48.5 1.0
N C:ARG20 5.0 40.5 1.0

Reference:

J.Zhao, T.Tandrup, B.Bissaro, S.Barbe, J.N.Poulsen, I.Andre, C.Dumon, M.J.O’Donohue, R.Faure. Probing the Determinants of the Transglycosylation/Hydrolysis Partition in A Retaining Alpha-L-Arabinofuranosidase N Biotechnol 2021.
ISSN: ESSN 1876-4347
DOI: 10.1016/J.NBT.2021.01.008
Page generated: Mon Jul 29 18:11:27 2024

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