Atomistry » Chlorine » PDB 6zpd-6zyu » 6zvw
Atomistry »
  Chlorine »
    PDB 6zpd-6zyu »
      6zvw »

Chlorine in PDB 6zvw: X-Ray Structure of the Haloalkane Dehalogenase HALOTAG7-Q165H Labeled with A Chloroalkane-Tetramethylrhodamine Fluorophore Substrate

Enzymatic activity of X-Ray Structure of the Haloalkane Dehalogenase HALOTAG7-Q165H Labeled with A Chloroalkane-Tetramethylrhodamine Fluorophore Substrate

All present enzymatic activity of X-Ray Structure of the Haloalkane Dehalogenase HALOTAG7-Q165H Labeled with A Chloroalkane-Tetramethylrhodamine Fluorophore Substrate:
3.8.1.5;

Protein crystallography data

The structure of X-Ray Structure of the Haloalkane Dehalogenase HALOTAG7-Q165H Labeled with A Chloroalkane-Tetramethylrhodamine Fluorophore Substrate, PDB code: 6zvw was solved by M.Tarnawski, M.Frei, J.Hiblot, K.Johnsson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.21 / 1.60
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 44.18, 47.56, 78.25, 97.37, 89.97, 114.26
R / Rfree (%) 22.2 / 26.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of the Haloalkane Dehalogenase HALOTAG7-Q165H Labeled with A Chloroalkane-Tetramethylrhodamine Fluorophore Substrate (pdb code 6zvw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the X-Ray Structure of the Haloalkane Dehalogenase HALOTAG7-Q165H Labeled with A Chloroalkane-Tetramethylrhodamine Fluorophore Substrate, PDB code: 6zvw:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6zvw

Go back to Chlorine Binding Sites List in 6zvw
Chlorine binding site 1 out of 2 in the X-Ray Structure of the Haloalkane Dehalogenase HALOTAG7-Q165H Labeled with A Chloroalkane-Tetramethylrhodamine Fluorophore Substrate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of the Haloalkane Dehalogenase HALOTAG7-Q165H Labeled with A Chloroalkane-Tetramethylrhodamine Fluorophore Substrate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:18.5
occ:1.00
NE1 A:TRP107 3.2 14.8 1.0
ND2 A:ASN41 3.3 21.5 1.0
N A:PRO206 3.5 17.4 1.0
CA A:PRO206 3.6 18.6 1.0
C20 A:OEH301 3.7 17.4 1.0
CD1 A:LEU209 3.7 18.4 1.0
CD A:PRO206 3.7 20.9 1.0
C A:PHE205 3.8 17.3 1.0
CD1 A:TRP107 3.8 16.0 1.0
CZ A:PHE168 3.8 18.7 1.0
CB A:PHE205 3.8 19.4 1.0
CB A:ASN41 3.9 16.9 1.0
CB A:PRO206 3.9 14.1 1.0
CG A:LEU209 3.9 16.0 1.0
O A:PHE205 4.0 16.6 1.0
C19 A:OEH301 4.1 21.7 1.0
CD2 A:LEU209 4.1 15.7 1.0
CG A:ASN41 4.1 17.1 1.0
CE2 A:PHE168 4.3 17.7 1.0
CG A:PRO206 4.4 19.1 1.0
CE2 A:TRP107 4.4 18.1 1.0
C18 A:OEH301 4.4 19.0 1.0
CA A:PHE205 4.5 18.3 1.0
CE2 A:PHE149 4.6 21.1 1.0
CE1 A:PHE168 4.7 16.1 1.0
OD1 A:ASP106 4.8 18.4 1.0
CG A:PHE205 4.8 19.9 1.0
OD2 A:ASP106 4.9 19.8 1.0
C A:PRO206 5.0 18.6 1.0
CZ2 A:TRP107 5.0 19.5 1.0

Chlorine binding site 2 out of 2 in 6zvw

Go back to Chlorine Binding Sites List in 6zvw
Chlorine binding site 2 out of 2 in the X-Ray Structure of the Haloalkane Dehalogenase HALOTAG7-Q165H Labeled with A Chloroalkane-Tetramethylrhodamine Fluorophore Substrate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of X-Ray Structure of the Haloalkane Dehalogenase HALOTAG7-Q165H Labeled with A Chloroalkane-Tetramethylrhodamine Fluorophore Substrate within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl304

b:18.4
occ:1.00
NE1 B:TRP107 3.2 17.0 1.0
ND2 B:ASN41 3.4 20.3 1.0
N B:PRO206 3.5 19.9 1.0
CA B:PRO206 3.6 17.2 1.0
C20 B:OEH303 3.7 17.8 1.0
C B:PHE205 3.7 17.0 1.0
CD B:PRO206 3.8 18.1 1.0
CD1 B:TRP107 3.8 18.8 1.0
CD1 B:LEU209 3.8 19.9 1.0
CZ B:PHE168 3.8 19.3 1.0
CB B:ASN41 3.8 20.7 1.0
CB B:PHE205 3.9 21.6 1.0
CB B:PRO206 3.9 18.9 1.0
C19 B:OEH303 3.9 18.3 1.0
O B:PHE205 4.0 17.6 1.0
CG B:LEU209 4.0 15.7 1.0
CG B:ASN41 4.1 19.5 1.0
CD2 B:LEU209 4.1 19.9 1.0
CE2 B:PHE168 4.3 20.7 1.0
CG B:PRO206 4.4 17.6 1.0
CA B:PHE205 4.4 20.6 1.0
CE2 B:TRP107 4.4 17.6 1.0
C18 B:OEH303 4.5 17.4 1.0
CE2 B:PHE149 4.6 22.6 1.0
CE1 B:PHE168 4.7 21.4 1.0
OD1 B:ASP106 4.8 18.6 1.0
CG B:PHE205 4.8 23.6 1.0
OD2 B:ASP106 5.0 18.3 1.0

Reference:

M.Tarnawski, M.Frei, J.Hiblot, K.Johnsson. X-Ray Structure of the Haloalkane Dehalogenase HALOTAG7-Q165H Labeled with A Chloroalkane-Tetramethylrhodamine Fluorophore Substrate To Be Published.
Page generated: Mon Jul 29 18:13:43 2024

Last articles

Cl in 3LL1
Cl in 3LKW
Cl in 3LK0
Cl in 3LK7
Cl in 3LJX
Cl in 3LJY
Cl in 3LJ7
Cl in 3LJ6
Cl in 3LIU
Cl in 3LID
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy