Atomistry » Chlorine » PDB 7a8s-7aj5 » 7aen
Atomistry »
  Chlorine »
    PDB 7a8s-7aj5 »
      7aen »

Chlorine in PDB 7aen: Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with Methyl 3-O-((7-Carboxy)Quinolin-2-Yl)-Methoxy)-Beta-D- Galactopyranoside

Protein crystallography data

The structure of Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with Methyl 3-O-((7-Carboxy)Quinolin-2-Yl)-Methoxy)-Beta-D- Galactopyranoside, PDB code: 7aen was solved by M.Hassan, V.S.Klavern, M.Hakansson, M.Anderluh, T.Tomasic, Z.Jakopin, J.U.Nilsson, R.Kovacic, B.Walse, C.Diehl, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.57 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.452, 61.124, 84.712, 90, 90, 90
R / Rfree (%) 13.9 / 21.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with Methyl 3-O-((7-Carboxy)Quinolin-2-Yl)-Methoxy)-Beta-D- Galactopyranoside (pdb code 7aen). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with Methyl 3-O-((7-Carboxy)Quinolin-2-Yl)-Methoxy)-Beta-D- Galactopyranoside, PDB code: 7aen:

Chlorine binding site 1 out of 1 in 7aen

Go back to Chlorine Binding Sites List in 7aen
Chlorine binding site 1 out of 1 in the Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with Methyl 3-O-((7-Carboxy)Quinolin-2-Yl)-Methoxy)-Beta-D- Galactopyranoside


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with Methyl 3-O-((7-Carboxy)Quinolin-2-Yl)-Methoxy)-Beta-D- Galactopyranoside within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:38.2
occ:1.00
NZ A:LYS113 3.1 46.7 1.0
N B:GLY131 3.2 26.1 1.0
N A:ASP112 3.2 32.9 1.0
CB A:ASP112 3.5 33.7 1.0
NZ B:LYS134 3.5 46.7 1.0
CB A:LEU110 3.8 26.4 1.0
CA A:ASP112 3.8 28.5 1.0
N A:LYS111 3.9 28.3 1.0
CA B:GLY131 4.0 29.0 1.0
OD2 A:ASP112 4.0 44.2 1.0
CG A:ASP112 4.1 40.0 1.0
CE A:LYS113 4.1 47.0 1.0
CB A:LYS111 4.2 27.4 1.0
C B:ILE130 4.2 23.4 1.0
N A:LYS113 4.2 26.1 1.0
CA B:ILE130 4.2 23.2 1.0
C A:LYS111 4.2 27.8 1.0
CG A:LYS113 4.3 33.8 1.0
C A:ASP112 4.3 27.6 1.0
CA A:LYS111 4.4 26.5 1.0
CG2 B:ILE130 4.4 29.5 1.0
CD1 A:LEU110 4.5 28.8 1.0
C A:LEU110 4.5 29.0 1.0
CG B:LYS134 4.5 32.3 1.0
CE B:LYS134 4.6 41.5 1.0
OE2 B:GLU133 4.6 30.2 1.0
CG A:LEU110 4.8 23.1 1.0
CA A:LEU110 4.8 27.6 1.0
CD A:LYS113 4.8 39.2 1.0
CB B:ILE130 4.9 24.4 1.0
CD B:LYS134 5.0 36.4 1.0

Reference:

M.Hassan, M.Hakansson, U.Nilsson. Crystal Structure of the Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with the Quinoline-Galactoside Ligand To Be Published.
Page generated: Mon Jul 29 18:27:27 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy