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Chlorine in PDB 7az7: Dna Polymerase Sliding Clamp From Escherichia Coli with Peptide 37 Bound

Protein crystallography data

The structure of Dna Polymerase Sliding Clamp From Escherichia Coli with Peptide 37 Bound, PDB code: 7az7 was solved by C.Monsarrat, G.Compain, C.Andre, I.Martiel, S.Engilberge, V.Olieric, P.Wolff, K.Brillet, M.Landolfo, C.Silva Da Veiga, J.Wagner, G.Guichard, D.Y.Burnouf, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 53.99 / 1.65
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 108.18, 67.62, 81.52, 90, 128.09, 90
R / Rfree (%) 18.4 / 21.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Dna Polymerase Sliding Clamp From Escherichia Coli with Peptide 37 Bound (pdb code 7az7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Dna Polymerase Sliding Clamp From Escherichia Coli with Peptide 37 Bound, PDB code: 7az7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7az7

Go back to Chlorine Binding Sites List in 7az7
Chlorine binding site 1 out of 2 in the Dna Polymerase Sliding Clamp From Escherichia Coli with Peptide 37 Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Dna Polymerase Sliding Clamp From Escherichia Coli with Peptide 37 Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cl7

b:42.7
occ:1.00
CLZ H:ZCL7 0.0 42.7 1.0
CZ H:ZCL7 1.7 39.2 1.0
CE2 H:ZCL7 2.7 38.7 1.0
CE1 H:ZCL7 2.7 36.1 1.0
CLE1 H:ZCL7 3.2 36.5 1.0
CD1 A:LEU155 3.4 24.8 1.0
CG A:PRO242 3.5 27.1 1.0
CD2 A:LEU155 3.7 22.6 1.0
CA A:GLY174 3.7 20.2 1.0
N A:GLY174 3.9 19.9 1.0
CD2 H:ZCL7 4.0 37.1 1.0
CD1 H:ZCL7 4.0 34.2 1.0
O H:HOH103 4.0 48.9 1.0
NH1 A:ARG152 4.0 31.2 1.0
CG A:LEU155 4.2 23.3 1.0
CG2 A:THR172 4.2 21.2 1.0
CB A:PRO242 4.5 23.7 1.0
CG H:ZCL7 4.5 35.0 1.0
CZ A:ARG152 4.5 41.0 1.0
CD A:PRO242 4.6 22.5 1.0
OG1 A:THR172 4.7 21.1 1.0
C A:ASP173 4.7 21.6 1.0
NH2 A:ARG152 4.9 33.5 1.0

Chlorine binding site 2 out of 2 in 7az7

Go back to Chlorine Binding Sites List in 7az7
Chlorine binding site 2 out of 2 in the Dna Polymerase Sliding Clamp From Escherichia Coli with Peptide 37 Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Dna Polymerase Sliding Clamp From Escherichia Coli with Peptide 37 Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cl7

b:36.5
occ:1.00
CLE1 H:ZCL7 0.0 36.5 1.0
CE1 H:ZCL7 1.7 36.1 1.0
CD1 H:ZCL7 2.7 34.2 1.0
CZ H:ZCL7 2.7 39.2 1.0
CLZ H:ZCL7 3.2 42.7 1.0
OG1 A:THR172 3.4 21.1 1.0
CG2 A:THR172 3.8 21.2 1.0
CB H:LEU6 3.8 27.4 1.0
CB A:PRO242 3.9 23.7 1.0
CG A:PRO242 4.0 27.1 1.0
CG H:ZCL7 4.0 35.0 1.0
CE2 H:ZCL7 4.0 38.7 1.0
CD1 H:LEU6 4.0 29.5 1.0
CA A:GLY174 4.1 20.2 1.0
CG2 A:VAL247 4.1 26.7 1.0
CB A:THR172 4.2 21.5 1.0
N A:GLY174 4.5 19.9 1.0
CD2 H:ZCL7 4.5 37.1 1.0
CG H:LEU6 4.6 29.9 1.0
CD1 A:LEU177 4.7 18.7 1.0
C A:GLY174 4.8 24.9 1.0
CG1 A:VAL247 4.9 28.0 1.0
O A:GLY174 5.0 24.6 1.0

Reference:

C.Monsarrat, D.Y.Burnouf. Dna Polymerase Sliding Clamp From Escherichia Coli with Peptide 37 Bound To Be Published.
Page generated: Sat Jul 12 23:02:07 2025

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