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Chlorine in PDB 7b3n: Amip Amidase-3 From Thermus Parvatiensis

Protein crystallography data

The structure of Amip Amidase-3 From Thermus Parvatiensis, PDB code: 7b3n was solved by S.Freitag-Pohl, E.Pohl, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.68 / 1.79
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 64.539, 97.988, 148.723, 90, 90, 90
R / Rfree (%) 18.5 / 22.5

Other elements in 7b3n:

The structure of Amip Amidase-3 From Thermus Parvatiensis also contains other interesting chemical elements:

Zinc (Zn) 5 atoms
Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Amip Amidase-3 From Thermus Parvatiensis (pdb code 7b3n). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Amip Amidase-3 From Thermus Parvatiensis, PDB code: 7b3n:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7b3n

Go back to Chlorine Binding Sites List in 7b3n
Chlorine binding site 1 out of 2 in the Amip Amidase-3 From Thermus Parvatiensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Amip Amidase-3 From Thermus Parvatiensis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:76.6
occ:1.00
HH12 B:ARG128 2.6 51.8 1.0
HH22 B:ARG128 2.8 54.8 1.0
HB1 C:ALA113 3.1 33.6 1.0
NH1 B:ARG128 3.4 52.2 1.0
NH2 B:ARG128 3.6 57.1 1.0
CZ B:ARG128 3.9 51.3 1.0
CB C:ALA113 4.0 32.9 1.0
HH11 B:ARG128 4.1 51.8 1.0
HH21 B:ARG128 4.3 54.8 1.0
O C:ALA113 4.3 38.2 1.0
HB2 C:ALA113 4.4 33.6 1.0
HB3 C:ALA113 4.5 33.6 1.0
HA C:ALA113 4.8 34.7 1.0
CA C:ALA113 4.9 35.1 1.0
C C:ALA113 4.9 39.5 1.0

Chlorine binding site 2 out of 2 in 7b3n

Go back to Chlorine Binding Sites List in 7b3n
Chlorine binding site 2 out of 2 in the Amip Amidase-3 From Thermus Parvatiensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Amip Amidase-3 From Thermus Parvatiensis within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl203

b:83.5
occ:1.00
H E:ARG154 2.8 57.0 1.0
HB2 E:SER153 3.3 59.8 1.0
N E:ARG154 3.6 55.5 1.0
CB E:ARG154 3.8 59.0 1.0
HB3 E:ARG154 3.8 59.3 0.0
H E:ALA155 3.9 55.8 1.0
HA E:SER153 4.1 59.6 1.0
CB E:SER153 4.2 58.9 1.0
CA E:ARG154 4.3 57.0 1.0
CA E:SER153 4.5 61.7 1.0
C E:SER153 4.5 60.6 1.0
HB3 E:SER153 4.6 59.8 1.0
N E:ALA155 4.6 53.6 1.0
HB2 E:ARG154 4.7 58.4 1.0
C E:ARG154 5.0 59.2 1.0

Reference:

S.Freitag-Pohl, E.Pohl. Amip Amidase-3 From Thermus Parvatiensis To Be Published.
Page generated: Sat Jul 12 23:08:25 2025

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