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Chlorine in PDB 7bvm: Crystal Structure of Lysozyme Delivered in Wheat Starch

Enzymatic activity of Crystal Structure of Lysozyme Delivered in Wheat Starch

All present enzymatic activity of Crystal Structure of Lysozyme Delivered in Wheat Starch:
3.2.1.17;

Protein crystallography data

The structure of Crystal Structure of Lysozyme Delivered in Wheat Starch, PDB code: 7bvm was solved by K.H.Nam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.12 / 2.00
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.360, 79.360, 38.630, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 23.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Lysozyme Delivered in Wheat Starch (pdb code 7bvm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Lysozyme Delivered in Wheat Starch, PDB code: 7bvm:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7bvm

Go back to Chlorine Binding Sites List in 7bvm
Chlorine binding site 1 out of 2 in the Crystal Structure of Lysozyme Delivered in Wheat Starch


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Lysozyme Delivered in Wheat Starch within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:41.1
occ:1.00
ND2 A:ASN113 3.2 30.5 1.0
CB A:ASN113 3.5 35.7 1.0
CG A:ASN113 3.9 38.3 1.0
CA A:ALA110 3.9 29.8 1.0
O A:VAL109 4.0 28.7 1.0
CG1 A:VAL109 4.0 42.9 1.0
C A:VAL109 4.3 27.4 1.0
N A:ALA110 4.3 30.1 1.0
CD A:ARG114 4.3 40.4 1.0
CG A:ARG114 4.4 34.3 1.0
CB A:ALA110 4.6 30.1 1.0
CA A:ASN113 4.8 33.4 1.0
C A:ALA110 4.9 35.7 1.0
O A:ALA110 4.9 32.7 1.0
CB A:VAL109 5.0 36.9 1.0

Chlorine binding site 2 out of 2 in 7bvm

Go back to Chlorine Binding Sites List in 7bvm
Chlorine binding site 2 out of 2 in the Crystal Structure of Lysozyme Delivered in Wheat Starch


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Lysozyme Delivered in Wheat Starch within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:53.9
occ:1.00
N A:GLY26 3.0 31.9 1.0
OG A:SER24 3.0 33.7 1.0
CA A:GLY26 3.4 30.9 1.0
CB A:SER24 3.5 32.7 1.0
CA A:GLN121 3.6 43.4 1.0
CD1 A:ILE124 3.8 52.6 1.0
CB A:GLN121 3.8 51.5 1.0
CG A:GLN121 4.0 73.8 1.0
N A:LEU25 4.0 36.6 1.0
N A:GLN121 4.1 40.9 1.0
C A:LEU25 4.2 27.7 1.0
CG1 A:ILE124 4.2 31.9 1.0
C A:SER24 4.2 32.5 1.0
O A:VAL120 4.4 42.3 1.0
C A:VAL120 4.4 45.1 1.0
CG2 A:VAL120 4.5 39.5 1.0
C A:GLY26 4.5 29.3 1.0
CA A:SER24 4.5 35.2 1.0
CA A:LEU25 4.6 32.4 1.0
N A:ASN27 4.7 31.4 1.0
O A:SER24 4.8 29.8 1.0
C A:GLN121 4.9 36.8 1.0
CB A:LEU25 4.9 32.2 1.0

Reference:

K.H.Nam, K.H.Nam. N/A N/A.
ISSN: ESSN 1422-0067
PubMed: 32397185
DOI: 10.3390/IJMS21093332
Page generated: Mon Jul 29 19:22:59 2024

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