Atomistry » Chlorine » PDB 7bmt-7c15 » 7c0s
Atomistry »
  Chlorine »
    PDB 7bmt-7c15 »
      7c0s »

Chlorine in PDB 7c0s: Crystal Structure of A Dinucleotide-Binding Protein (F79A) of Abc Transporter Endogenously Bound to Uridylyl-3'-5'-Phospho-Guanosine (Form II)

Protein crystallography data

The structure of Crystal Structure of A Dinucleotide-Binding Protein (F79A) of Abc Transporter Endogenously Bound to Uridylyl-3'-5'-Phospho-Guanosine (Form II), PDB code: 7c0s was solved by S.P.Kanaujia, M.Chandravanshi, R.Samanta, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 60.56 / 1.85
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 66.539, 58.36, 123.82, 90, 94.81, 90
R / Rfree (%) 20.5 / 24

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Dinucleotide-Binding Protein (F79A) of Abc Transporter Endogenously Bound to Uridylyl-3'-5'-Phospho-Guanosine (Form II) (pdb code 7c0s). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Dinucleotide-Binding Protein (F79A) of Abc Transporter Endogenously Bound to Uridylyl-3'-5'-Phospho-Guanosine (Form II), PDB code: 7c0s:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7c0s

Go back to Chlorine Binding Sites List in 7c0s
Chlorine binding site 1 out of 2 in the Crystal Structure of A Dinucleotide-Binding Protein (F79A) of Abc Transporter Endogenously Bound to Uridylyl-3'-5'-Phospho-Guanosine (Form II)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Dinucleotide-Binding Protein (F79A) of Abc Transporter Endogenously Bound to Uridylyl-3'-5'-Phospho-Guanosine (Form II) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:36.4
occ:1.00
O A:HOH776 2.3 23.2 1.0
N A:ALA174 3.0 13.0 1.0
O A:HOH813 3.2 15.4 1.0
O A:ARG360 3.2 13.8 1.0
CB A:ALA174 3.6 12.8 1.0
CA A:GLY365 3.6 17.6 1.0
CB A:ASP173 3.6 16.1 1.0
CA A:ASP173 3.7 14.9 1.0
C A:ASP173 3.8 14.0 1.0
CD1 A:PHE361 3.8 16.9 1.0
CA A:ALA174 3.9 13.3 1.0
O A:HOH945 4.0 29.6 1.0
CA A:PHE361 4.0 16.1 1.0
C A:ARG360 4.1 14.7 1.0
N A:GLY365 4.3 16.9 1.0
CE1 A:PHE361 4.3 16.7 1.0
O A:HOH610 4.4 45.6 1.0
NZ A:LYS369 4.4 23.7 1.0
N A:PHE361 4.4 14.9 1.0
NH1 A:ARG360 4.5 15.6 1.0
O A:PHE361 4.5 18.1 1.0
CG A:PHE361 4.6 17.0 1.0
CG A:ASP173 4.7 16.1 1.0
C A:PHE361 4.8 17.7 1.0
CB A:PHE361 4.8 16.9 1.0
C A:GLY365 4.8 17.8 1.0
N A:SER175 4.9 12.8 1.0
C A:ALA174 5.0 12.6 1.0
O A:HOH912 5.0 42.5 1.0

Chlorine binding site 2 out of 2 in 7c0s

Go back to Chlorine Binding Sites List in 7c0s
Chlorine binding site 2 out of 2 in the Crystal Structure of A Dinucleotide-Binding Protein (F79A) of Abc Transporter Endogenously Bound to Uridylyl-3'-5'-Phospho-Guanosine (Form II)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Dinucleotide-Binding Protein (F79A) of Abc Transporter Endogenously Bound to Uridylyl-3'-5'-Phospho-Guanosine (Form II) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:37.7
occ:1.00
O B:HOH711 2.6 30.4 1.0
N B:ALA174 3.0 13.7 1.0
O B:ARG360 3.0 16.6 1.0
O B:HOH767 3.2 16.4 1.0
CB B:ALA174 3.5 14.0 1.0
CA B:GLY365 3.5 18.5 1.0
CB B:ASP173 3.7 17.6 1.0
CA B:ASP173 3.8 16.2 1.0
CA B:ALA174 3.8 14.2 1.0
C B:ASP173 3.9 14.6 1.0
CD1 B:PHE361 3.9 18.2 1.0
O B:HOH834 3.9 33.9 1.0
CA B:PHE361 4.0 18.3 1.0
C B:ARG360 4.0 15.8 1.0
N B:GLY365 4.2 17.2 1.0
O B:HOH916 4.2 28.5 1.0
N B:PHE361 4.3 17.1 1.0
CE1 B:PHE361 4.4 17.4 1.0
NH1 B:ARG360 4.4 16.3 1.0
NZ B:LYS369 4.4 28.3 1.0
O B:PHE361 4.5 20.7 1.0
CG B:PHE361 4.6 18.2 1.0
C B:PHE361 4.8 19.6 1.0
CB B:PHE361 4.8 18.9 1.0
C B:GLY365 4.8 18.7 1.0
CG B:ASP173 4.8 17.7 1.0
C B:ALA174 4.9 13.3 1.0
N B:SER175 5.0 13.1 1.0

Reference:

M.Chandravanshi, R.Samanta, S.P.Kanaujia. Structural and Thermodynamic Insights Into the Novel Dinucleotide-Binding Protein of Abc Transporter Unveils Its Moonlighting Function. Febs J. 2021.
ISSN: ISSN 1742-464X
PubMed: 33599038
DOI: 10.1111/FEBS.15774
Page generated: Mon Jul 29 19:24:22 2024

Last articles

Br in 2ANR
Br in 2AG6
Br in 2A4T
Br in 288D
Br in 278D
Br in 1ZOG
Br in 277D
Br in 276D
Br in 242D
Br in 238D
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy