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Chlorine in PDB 7c4v: Microed Structure of Anorthic Vancomycin at 1.05 A Resolution

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution (pdb code 7c4v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution, PDB code: 7c4v:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 7c4v

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Chlorine binding site 1 out of 5 in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Microed Structure of Anorthic Vancomycin at 1.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2

b:9.7
occ:1.00
CL A:OMZ2 0.0 9.7 1.0
CE1 A:OMZ2 1.7 8.2 1.0
CZ A:OMZ2 2.6 7.4 1.0
CD1 A:OMZ2 2.6 7.6 1.0
OH A:OMZ2 2.9 7.0 1.0
C6 C:BGC1 3.4 8.8 1.0
C5 A:GHP4 3.4 5.9 1.0
O6 C:BGC1 3.4 9.0 1.0
O5 C:BGC1 3.6 7.6 1.0
C6 A:GHP4 3.7 5.6 1.0
CG A:OMZ2 3.9 7.0 1.0
CE2 A:OMZ2 3.9 7.4 1.0
C5 C:BGC1 3.9 8.1 1.0
C4 A:GHP4 4.3 5.7 1.0
O A:HOH217 4.3 13.2 1.0
CD2 A:OMZ2 4.4 7.1 1.0
O A:ASN3 4.4 5.2 1.0
C1 C:BGC1 4.7 7.0 1.0
O4 A:GHP4 4.7 6.2 1.0
C1 A:GHP4 4.7 5.1 1.0

Chlorine binding site 2 out of 5 in 7c4v

Go back to Chlorine Binding Sites List in 7c4v
Chlorine binding site 2 out of 5 in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Microed Structure of Anorthic Vancomycin at 1.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl6

b:8.0
occ:1.00
CL A:OMY6 0.0 8.0 1.0
CE1 A:OMY6 1.7 6.8 1.0
CD1 A:OMY6 2.7 6.2 1.0
CZ A:OMY6 2.7 6.2 1.0
OCZ A:OMY6 2.9 6.0 1.0
O A:HOH213 3.0 16.0 1.0
C3 A:GHP4 3.2 5.6 1.0
C2 A:GHP4 3.4 5.4 1.0
C5 C:RER2 3.6 9.6 1.0
C5A C:RER2 3.6 9.6 1.0
C4 C:RER2 3.8 10.2 1.0
CG A:OMY6 3.9 5.5 1.0
CE2 A:OMY6 4.0 5.8 1.0
C4 A:GHP4 4.0 5.7 1.0
C3A C:RER2 4.1 10.0 1.0
O A:HOH220 4.1 13.5 1.0
O A:GHP4 4.1 4.6 1.0
C1 A:GHP4 4.4 5.1 1.0
O4 A:GHP4 4.5 6.2 1.0
CD2 A:OMY6 4.5 5.4 1.0
C3 C:RER2 4.6 9.9 1.0
C A:GHP4 4.7 4.6 1.0
C5 A:GHP4 4.8 5.9 1.0
O5 C:RER2 4.9 9.0 1.0
C6 A:GHP4 4.9 5.6 1.0
O4 C:RER2 4.9 10.7 1.0

Chlorine binding site 3 out of 5 in 7c4v

Go back to Chlorine Binding Sites List in 7c4v
Chlorine binding site 3 out of 5 in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Microed Structure of Anorthic Vancomycin at 1.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl2

b:9.9
occ:1.00
CL B:OMZ2 0.0 9.9 1.0
CE1 B:OMZ2 1.7 8.6 1.0
CZ B:OMZ2 2.6 8.2 1.0
CD1 B:OMZ2 2.6 8.0 1.0
OH B:OMZ2 2.9 7.9 1.0
C5 B:GHP4 3.5 7.3 1.0
C6 B:GHP4 3.7 6.4 1.0
C6 D:BGC1 3.9 13.6 1.0
CG B:OMZ2 3.9 7.5 1.0
CE2 B:OMZ2 3.9 7.9 1.0
O B:HOH117 4.0 13.6 1.0
O5 D:BGC1 4.0 12.2 1.0
CD2 B:OMZ2 4.4 7.8 1.0
O B:ASN3 4.5 6.4 1.0
C4 B:GHP4 4.5 7.5 1.0
C5 D:BGC1 4.5 13.1 1.0
C1 B:GHP4 4.8 6.0 1.0
O4 B:GHP4 5.0 9.2 1.0

Chlorine binding site 4 out of 5 in 7c4v

Go back to Chlorine Binding Sites List in 7c4v
Chlorine binding site 4 out of 5 in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Microed Structure of Anorthic Vancomycin at 1.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl6

b:9.5
occ:1.00
CL B:OMY6 0.0 9.5 1.0
CE1 B:OMY6 1.7 8.5 1.0
CD1 B:OMY6 2.6 8.2 1.0
CZ B:OMY6 2.8 7.9 1.0
O B:HOH109 2.9 12.0 1.0
O B:HOH103 2.9 15.3 1.0
O B:HOH118 3.1 9.8 1.0
OCZ B:OMY6 3.1 7.4 1.0
O B:HOH121 3.1 12.6 1.0
C3A D:RER2 3.3 14.2 1.0
C3 B:GHP4 3.3 7.0 1.0
C2 B:GHP4 3.5 6.3 1.0
O B:HOH114 3.7 9.2 1.0
CG B:OMY6 3.9 7.8 1.0
CE2 B:OMY6 4.0 7.9 1.0
O B:GHP4 4.1 5.9 1.0
C4 B:GHP4 4.3 7.5 1.0
O B:HOH123 4.4 13.0 1.0
C1 B:GHP4 4.5 6.0 1.0
CD2 B:OMY6 4.5 7.9 1.0
C B:GHP4 4.7 5.6 1.0
C3 D:RER2 4.7 14.0 1.0
O4 B:GHP4 4.8 9.2 1.0
O B:HOH110 4.8 7.0 1.0

Chlorine binding site 5 out of 5 in 7c4v

Go back to Chlorine Binding Sites List in 7c4v
Chlorine binding site 5 out of 5 in the Microed Structure of Anorthic Vancomycin at 1.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Microed Structure of Anorthic Vancomycin at 1.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl101

b:5.7
occ:1.00
N A:GHP5 3.2 4.2 1.0
O A:HOH212 3.2 15.8 1.0
CA A:GHP4 3.4 4.9 1.0
O A:GHP5 3.6 4.4 1.0
C A:GHP4 3.7 4.6 1.0
O A:ASN3 3.8 5.2 1.0
CA A:GHP5 4.2 3.8 1.0
N A:GHP4 4.3 4.7 1.0
C1 A:GHP4 4.3 5.1 1.0
C A:GHP5 4.3 4.1 1.0
C A:ASN3 4.4 4.9 1.0
C6 A:GHP5 4.4 4.1 1.0
C1 A:GHP5 4.7 3.5 1.0
C2 A:GHP4 4.8 5.4 1.0
O A:GHP4 4.9 4.6 1.0

Reference:

Q.Fan, L.Li, H.Xue, H.Zhou, L.Zhao, J.Liu, J.Mao, S.Wu, S.Zhang, C.Wu, X.Li, X.Zhou, J.Wang. Precise Control Over Kinetics of Molecular Assembly: Production of Particles with Tunable Sizes and Crystalline Forms. Angew.Chem.Int.Ed.Engl. 2020.
ISSN: ESSN 1521-3773
PubMed: 32432368
DOI: 10.1002/ANIE.202003922
Page generated: Sat Jul 12 23:30:46 2025

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