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Chlorine in PDB 7cri: 1 Ps Structure of Chloride Ion Pumping Rhodopsin (Clr) with Ntq Motif

Protein crystallography data

The structure of 1 Ps Structure of Chloride Ion Pumping Rhodopsin (Clr) with Ntq Motif, PDB code: 7cri was solved by J.H.Yun, H.Liu, W.T.Lee, M.Schmidt, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.64 / 1.85
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 103.370, 50.090, 69.390, 90.00, 109.69, 90.00
R / Rfree (%) 29.5 / 37.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 1 Ps Structure of Chloride Ion Pumping Rhodopsin (Clr) with Ntq Motif (pdb code 7cri). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the 1 Ps Structure of Chloride Ion Pumping Rhodopsin (Clr) with Ntq Motif, PDB code: 7cri:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7cri

Go back to Chlorine Binding Sites List in 7cri
Chlorine binding site 1 out of 2 in the 1 Ps Structure of Chloride Ion Pumping Rhodopsin (Clr) with Ntq Motif


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 1 Ps Structure of Chloride Ion Pumping Rhodopsin (Clr) with Ntq Motif within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:11.8
occ:1.00
CA A:ALA61 3.6 6.1 1.0
O A:HOH416 3.8 5.5 1.0
CB A:ASN98 3.8 5.2 1.0
CB A:ALA61 3.9 3.2 1.0
NE1 A:TRP99 4.0 3.7 1.0
CG2 A:THR102 4.1 4.7 1.0
CD1 A:TRP99 4.2 2.9 1.0
O A:ARG95 4.2 3.1 1.0
N A:ALA61 4.2 11.4 1.0
ND2 A:ASN98 4.3 15.3 1.0
CB A:ILE64 4.3 8.3 1.0
NZ A:LYS235 4.4 4.2 1.0
CG1 A:ILE64 4.4 13.1 1.0
O A:ASN98 4.4 8.3 1.0
OG1 A:THR102 4.4 11.8 1.0
CG A:ARG95 4.5 11.3 1.0
CD A:LYS235 4.5 2.4 1.0
CG A:ASN98 4.5 9.9 1.0
C A:ASN98 4.6 9.5 1.0
CG2 A:ILE64 4.7 5.8 1.0
CE A:LYS235 4.7 4.3 1.0
CA A:ARG95 4.7 6.2 1.0
O A:SER60 4.7 5.8 1.0
C A:SER60 4.8 9.6 1.0
C A:ALA61 4.8 4.5 1.0
CB A:THR102 4.9 8.6 1.0
CA A:ASN98 4.9 7.1 1.0
O A:ALA61 4.9 7.7 1.0
N A:TRP99 4.9 7.3 1.0
C A:ARG95 4.9 5.0 1.0
C15 A:RET303 5.0 2.0 1.0
CE2 A:TRP99 5.0 3.6 1.0

Chlorine binding site 2 out of 2 in 7cri

Go back to Chlorine Binding Sites List in 7cri
Chlorine binding site 2 out of 2 in the 1 Ps Structure of Chloride Ion Pumping Rhodopsin (Clr) with Ntq Motif


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 1 Ps Structure of Chloride Ion Pumping Rhodopsin (Clr) with Ntq Motif within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:26.6
occ:0.93
N A:LYS46 3.1 10.7 1.0
CB A:LYS46 3.3 6.4 1.0
CG A:LYS46 3.4 13.5 1.0
CE A:LYS46 3.7 33.4 1.0
CD A:PRO45 3.7 4.9 1.0
N A:PRO45 3.8 4.2 1.0
CA A:LYS46 3.8 13.1 1.0
CB A:PRO45 3.8 7.6 1.0
CB A:ALA44 3.9 0.0 1.0
C A:PRO45 4.0 8.5 1.0
CD A:LYS46 4.1 29.9 1.0
CA A:PRO45 4.1 6.9 1.0
CG A:PRO45 4.1 4.2 1.0
C A:ALA44 4.3 5.5 1.0
NZ A:LYS46 4.4 33.5 1.0
CA A:ALA44 4.7 4.2 1.0
O A:ALA44 4.9 4.5 1.0

Reference:

J.H.Yun, H.Liu, W.T.Lee, M.Schmidt. 1 Ps Structure of Chloride Ion Pumping Rhodopsin (Clr) with Ntq Motif To Be Published.
Page generated: Sat Jul 12 23:52:17 2025

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