Atomistry » Chlorine » PDB 7cvt-7daf » 7cxa
Atomistry »
  Chlorine »
    PDB 7cvt-7daf »
      7cxa »

Chlorine in PDB 7cxa: Structure of Human Galectin-3 Crd in Complex with Td-139 Belonging to P31 Space Group.

Protein crystallography data

The structure of Structure of Human Galectin-3 Crd in Complex with Td-139 Belonging to P31 Space Group., PDB code: 7cxa was solved by A.Kumar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.09 / 1.97
Space group P 31
Cell size a, b, c (Å), α, β, γ (°) 40.843, 40.843, 152.631, 90, 90, 120
R / Rfree (%) 20.2 / 23.5

Other elements in 7cxa:

The structure of Structure of Human Galectin-3 Crd in Complex with Td-139 Belonging to P31 Space Group. also contains other interesting chemical elements:

Fluorine (F) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Human Galectin-3 Crd in Complex with Td-139 Belonging to P31 Space Group. (pdb code 7cxa). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Human Galectin-3 Crd in Complex with Td-139 Belonging to P31 Space Group., PDB code: 7cxa:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7cxa

Go back to Chlorine Binding Sites List in 7cxa
Chlorine binding site 1 out of 2 in the Structure of Human Galectin-3 Crd in Complex with Td-139 Belonging to P31 Space Group.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Human Galectin-3 Crd in Complex with Td-139 Belonging to P31 Space Group. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:71.0
occ:1.00
H22 A:TD2302 2.8 70.9 1.0
OD1 A:ASN160 3.6 44.7 1.0
H19 A:TD2302 3.6 62.6 1.0
H8 A:TD2302 3.6 68.3 1.0
NE A:ARG162 3.7 50.1 1.0
C8 A:TD2302 3.8 69.8 1.0
ND2 A:ASN160 4.1 50.4 1.0
CD A:ARG162 4.1 40.0 1.0
CG A:ARG162 4.1 46.6 1.0
CB A:ARG144 4.2 43.5 1.0
C13 A:TD2302 4.2 68.2 1.0
CZ A:ARG162 4.2 47.4 1.0
CG A:ASN160 4.3 42.9 1.0
H17 A:TD2302 4.3 61.9 1.0
NH2 A:ARG162 4.5 63.4 1.0
O41 A:TD2302 4.5 62.2 1.0
C21 A:TD2302 4.6 64.4 1.0
C9 A:TD2302 4.7 71.2 1.0
H20 A:TD2302 4.7 57.9 1.0
C12 A:TD2302 4.8 66.5 1.0
O2 A:TD2302 4.9 55.2 1.0
N7 A:TD2302 4.9 73.3 1.0
C14 A:TD2302 5.0 70.3 1.0

Chlorine binding site 2 out of 2 in 7cxa

Go back to Chlorine Binding Sites List in 7cxa
Chlorine binding site 2 out of 2 in the Structure of Human Galectin-3 Crd in Complex with Td-139 Belonging to P31 Space Group.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Human Galectin-3 Crd in Complex with Td-139 Belonging to P31 Space Group. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:90.2
occ:1.00
H22 B:TD2302 2.7 74.7 1.0
H19 B:TD2302 3.5 60.7 1.0
H8 B:TD2302 3.6 72.3 1.0
C8 B:TD2302 3.7 77.5 1.0
OD1 B:ASN160 3.7 45.0 1.0
CD B:ARG144 3.9 71.8 1.0
NE B:ARG162 3.9 47.1 1.0
ND2 B:ASN160 4.2 50.6 1.0
C13 B:TD2302 4.2 73.0 1.0
H17 B:TD2302 4.2 56.6 1.0
NH1 B:ARG144 4.3 87.3 1.0
CB B:ARG144 4.3 58.6 1.0
CG B:ASN160 4.4 52.7 1.0
CD B:ARG162 4.4 43.8 1.0
H20 B:TD2302 4.4 61.9 1.0
CZ B:ARG162 4.4 48.7 1.0
C21 B:TD2302 4.4 63.1 1.0
O41 B:TD2302 4.5 54.5 1.0
CG B:ARG162 4.5 42.0 1.0
C9 B:TD2302 4.6 72.5 1.0
NH2 B:ARG162 4.6 41.8 1.0
C12 B:TD2302 4.7 66.9 1.0
O2 B:TD2302 4.7 61.4 1.0
N7 B:TD2302 4.7 71.2 1.0
CG B:ARG144 4.8 63.8 1.0
NE B:ARG144 4.9 76.2 1.0
C14 B:TD2302 5.0 76.7 1.0

Reference:

A.Kumar, M.Paul, M.Panda, S.Jayaram, N.Kalidindi, H.Sale, M.Vetrichelvan, A.Gupta, A.Mathur, B.Beno, A.Regueiro-Ren, D.Cheng, M.Ramarao, K.Ghosh. Molecular Mechanism of Interspecies Differences in the Binding Affinity of TD139 to Galectin-3. Glycobiology 2021.
ISSN: ESSN 1460-2423
PubMed: 34228782
DOI: 10.1093/GLYCOB/CWAB072
Page generated: Sat Jul 12 23:54:27 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy