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Chlorine in PDB 7dsy: Crystal Structure of Rnase L in Complex with KM05073

Protein crystallography data

The structure of Crystal Structure of Rnase L in Complex with KM05073, PDB code: 7dsy was solved by J.Tang, H.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.50 / 2.65
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 59.32, 111.05, 262.83, 90, 90, 90
R / Rfree (%) 19.9 / 27

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Rnase L in Complex with KM05073 (pdb code 7dsy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Rnase L in Complex with KM05073, PDB code: 7dsy:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7dsy

Go back to Chlorine Binding Sites List in 7dsy
Chlorine binding site 1 out of 2 in the Crystal Structure of Rnase L in Complex with KM05073


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Rnase L in Complex with KM05073 within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Cl802

b:127.0
occ:1.00
CL1 a:HFX802 0.0 127.0 1.0
C4 a:HFX802 1.7 108.0 1.0
C3 a:HFX802 2.8 91.8 1.0
S1 a:HFX802 3.0 115.0 1.0
O a:CYS435 3.3 85.3 1.0
C5 a:HFX802 3.3 91.3 1.0
CZ2 a:TRP341 3.7 87.4 1.0
CG2 a:ILE369 3.9 90.8 1.0
C a:CYS435 4.0 91.6 1.0
C2 a:HFX802 4.0 101.0 1.0
NE1 a:TRP341 4.1 69.6 1.0
C1 a:HFX802 4.1 111.4 1.0
CE2 a:TRP341 4.2 81.2 1.0
O a:GLU436 4.2 80.7 1.0
C a:GLU436 4.3 70.6 1.0
N a:TYR437 4.5 63.5 1.0
O a:HOH921 4.6 105.4 1.0
N a:GLU436 4.6 85.7 1.0
CA a:GLU436 4.7 75.2 1.0
C6 a:HFX802 4.7 100.8 1.0
CA a:CYS435 4.8 88.0 1.0
CH2 a:TRP341 4.8 98.2 1.0
N a:CYS435 4.8 85.1 1.0
CB a:CYS435 4.9 81.5 1.0
CA a:TYR437 4.9 71.5 1.0
NH1 a:ARG340 4.9 77.9 1.0

Chlorine binding site 2 out of 2 in 7dsy

Go back to Chlorine Binding Sites List in 7dsy
Chlorine binding site 2 out of 2 in the Crystal Structure of Rnase L in Complex with KM05073


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Rnase L in Complex with KM05073 within 5.0Å range:
probe atom residue distance (Å) B Occ
b:Cl802

b:111.4
occ:1.00
CL1 b:HFX802 0.0 111.4 1.0
C4 b:HFX802 1.7 103.2 1.0
C3 b:HFX802 2.8 96.4 1.0
S1 b:HFX802 3.0 115.6 1.0
C5 b:HFX802 3.3 93.3 1.0
CZ2 b:TRP341 3.7 63.6 1.0
CG2 b:ILE369 3.7 80.6 1.0
O b:CYS435 4.0 76.2 1.0
C2 b:HFX802 4.0 98.7 1.0
C1 b:HFX802 4.1 109.0 1.0
O b:GLU436 4.3 82.9 1.0
C b:GLU436 4.3 73.7 1.0
N b:TYR437 4.4 71.2 1.0
O b:HOH962 4.5 88.5 1.0
CA b:TYR437 4.5 67.0 1.0
NH1 b:ARG340 4.6 77.3 1.0
CH2 b:TRP341 4.6 64.7 1.0
CE2 b:TRP341 4.6 67.4 1.0
N b:THR438 4.6 72.4 1.0
C b:TYR437 4.6 67.5 1.0
C b:CYS435 4.7 81.4 1.0
NE1 b:TRP341 4.7 59.8 1.0
C6 b:HFX802 4.8 88.7 1.0
OE1 b:GLU441 4.8 93.2 1.0
OG1 b:THR438 5.0 105.2 1.0

Reference:

J.Tang, H.Huang. Crystal Structure of Rnase L in Complex with KM05073 To Be Published.
Page generated: Sun Jul 13 00:12:55 2025

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