Atomistry » Chlorine » PDB 7epi-7f6k » 7exs
Atomistry »
  Chlorine »
    PDB 7epi-7f6k »
      7exs »

Chlorine in PDB 7exs: Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R

Enzymatic activity of Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R

All present enzymatic activity of Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R:
1.5.3.1;

Protein crystallography data

The structure of Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R, PDB code: 7exs was solved by Y.Xin, C.Shen, M.W.Tang, Y.Shi, Z.T.Guo, Z.H.Gu, J.Shao, L.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 65.18 / 1.42
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 130.362, 47.141, 64.763, 90, 90, 90
R / Rfree (%) 19 / 21.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R (pdb code 7exs). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R, PDB code: 7exs:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7;

Chlorine binding site 1 out of 7 in 7exs

Go back to Chlorine Binding Sites List in 7exs
Chlorine binding site 1 out of 7 in the Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl408

b:14.8
occ:1.00
 O A:HOH557 3.0 13.7 1.0
O3' A:FAD401 3.1 13.8 1.0
N A:GLY341 3.2 13.4 1.0
N A:THR315 3.4 12.7 1.0
N A:SER340 3.5 14.2 1.0
C3' A:FAD401 3.5 12.3 1.0
CA A:TYR314 3.7 13.0 1.0
C A:PHE339 3.8 13.3 1.0
CA A:GLY341 3.8 14.9 1.0
CB A:PHE339 3.9 11.9 1.0
C1' A:FAD401 4.1 13.2 1.0
C A:TYR314 4.1 13.5 1.0
CA A:PHE339 4.1 12.5 1.0
C A:SER340 4.2 14.5 1.0
CB A:TYR314 4.2 14.4 1.0
CA A:SER340 4.3 14.8 1.0
O A:PHE339 4.3 13.4 1.0
O A:LEU313 4.4 14.5 1.0
O A:THR315 4.4 14.4 1.0
N A:PHE339 4.4 13.4 1.0
OG A:SER45 4.4 14.7 1.0
O A:HOH515 4.4 15.1 1.0
C2' A:FAD401 4.5 12.9 1.0
CD1 A:TYR314 4.5 13.2 1.0
CA A:THR315 4.5 14.0 1.0
C5' A:FAD401 4.5 12.6 1.0
C4' A:FAD401 4.6 12.8 1.0
C A:GLY341 4.6 14.2 1.0
CB A:SER45 4.7 14.4 1.0
CG A:TYR314 4.7 11.8 1.0
CB A:THR315 4.7 15.4 1.0
N A:HIS342 4.8 12.3 1.0
C A:THR315 4.8 14.5 1.0
N A:TYR314 4.9 13.2 1.0
OG1 A:THR315 4.9 15.7 1.0

Chlorine binding site 2 out of 7 in 7exs

Go back to Chlorine Binding Sites List in 7exs
Chlorine binding site 2 out of 7 in the Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl409

b:47.3
occ:1.00
 N A:VAL88 2.9 16.7 1.0
CB A:VAL88 3.7 17.1 1.0
CA A:ARG87 3.8 15.5 1.0
C A:ARG87 3.8 15.8 1.0
CA A:VAL88 3.9 16.2 1.0
CG2 A:VAL88 3.9 18.2 1.0
O A:LEU86 4.0 21.3 1.0
O A:VAL88 4.3 21.3 1.0
NH2 A:ARG84 4.3 50.7 1.0
C A:VAL88 4.6 17.6 1.0
N A:ARG87 4.6 15.5 1.0
CG A:ARG87 4.6 20.1 1.0
C A:LEU86 4.6 18.8 1.0
CB A:ARG87 4.8 18.3 1.0
O A:ARG87 5.0 15.0 1.0

Chlorine binding site 3 out of 7 in 7exs

Go back to Chlorine Binding Sites List in 7exs
Chlorine binding site 3 out of 7 in the Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl410

b:53.7
occ:1.00
 NH2 A:ARG234 3.4 26.1 1.0
O A:HOH532 3.5 29.4 1.0
O A:HOH710 3.7 35.3 1.0
NE A:ARG234 4.0 21.2 1.0
CB A:ASP231 4.2 22.7 1.0
CZ A:ARG234 4.2 24.2 1.0
CA A:GLY301 4.6 17.4 1.0
N A:ASP231 4.6 26.2 1.0
O A:GLY301 4.7 19.2 1.0
CB A:ASP230 4.9 30.9 1.0

Chlorine binding site 4 out of 7 in 7exs

Go back to Chlorine Binding Sites List in 7exs
Chlorine binding site 4 out of 7 in the Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl411

b:45.4
occ:1.00
 NH1 A:ARG194 3.8 29.8 1.0
N A:ARG194 3.9 20.3 1.0
CB A:ARG194 4.2 20.0 1.0
CD A:ARG194 4.4 26.7 1.0
CG A:ARG194 4.4 21.1 1.0
CA A:LEU193 4.6 20.4 1.0
CA A:ARG194 4.6 19.6 1.0
C A:LEU193 4.7 19.3 1.0
O A:ARG194 4.8 20.3 1.0
CZ A:ARG194 4.9 30.2 1.0

Chlorine binding site 5 out of 7 in 7exs

Go back to Chlorine Binding Sites List in 7exs
Chlorine binding site 5 out of 7 in the Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl412

b:57.5
occ:1.00
 O A:HIS327 3.0 20.2 1.0
CB A:ARG326 3.8 23.2 1.0
CA A:PRO331 3.9 23.6 1.0
CB A:PRO331 3.9 26.7 1.0
CD A:ARG326 4.1 40.9 1.0
C A:HIS327 4.1 20.2 1.0
O A:PRO328 4.2 27.5 1.0
N A:PRO331 4.2 24.1 1.0
NH1 A:ARG326 4.3 47.5 1.0
C A:PRO328 4.3 26.3 1.0
NE A:ARG326 4.4 46.7 1.0
CA A:PRO328 4.5 25.1 1.0
CZ A:ARG326 4.5 49.1 1.0
C A:TRP330 4.6 23.3 1.0
O A:HOH642 4.6 33.0 1.0
CG A:ARG326 4.6 29.6 1.0
CD A:PRO331 4.8 24.5 1.0
O A:TRP330 4.8 21.9 1.0
C A:ARG326 4.8 18.7 1.0
N A:PRO328 4.9 23.5 1.0
N A:HIS327 4.9 18.1 1.0
CG A:PRO331 4.9 26.6 1.0
N A:TRP330 4.9 21.0 1.0
N A:GLU329 4.9 25.6 1.0
C A:GLU329 5.0 24.1 1.0

Chlorine binding site 6 out of 7 in 7exs

Go back to Chlorine Binding Sites List in 7exs
Chlorine binding site 6 out of 7 in the Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl413

b:54.2
occ:1.00
 N A:THR309 3.1 17.9 1.0
CA A:MET308 3.5 19.1 1.0
O A:THR309 3.5 21.3 1.0
CG A:MET308 3.5 30.1 1.0
C A:MET308 3.8 18.0 1.0
OG1 A:THR309 3.8 24.9 1.0
CB A:MET308 4.0 20.8 1.0
CA A:THR309 4.1 17.5 1.0
C A:THR309 4.3 19.2 1.0
CB A:THR309 4.5 21.8 1.0
O A:LEU307 4.7 21.2 1.0
N A:MET308 4.7 17.6 1.0
O A:MET308 5.0 17.6 1.0

Chlorine binding site 7 out of 7 in 7exs

Go back to Chlorine Binding Sites List in 7exs
Chlorine binding site 7 out of 7 in the Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl414

b:57.5
occ:1.00
 O A:THR89 4.1 17.5 1.0
CG1 A:VAL141 4.1 16.2 1.0
CG A:PRO241 4.3 17.2 1.0
CA A:GLY90 4.3 14.8 1.0
O A:HOH545 4.3 30.8 1.0
O A:HOH564 4.6 27.4 1.0
CZ A:PHE128 4.7 22.4 1.0
O A:GLU142 4.7 17.0 1.0
CE1 A:PHE128 4.8 23.6 1.0
C A:THR89 4.9 15.7 1.0
CB A:PRO241 5.0 17.6 1.0
C A:GLY90 5.0 15.9 1.0

Reference:

Y.Xin, C.Shen, M.W.Tang, Y.Shi, Z.T.Guo, Z.H.Gu, J.Shao, L.Zhang. Thermomicrobium Roseum Sarcosine Oxidase Mutant - S320R To Be Published.
Page generated: Sun Jul 13 00:30:34 2025

Last articles

Mn in 4QRN
Mn in 4QPX
Mn in 4QKD
Mn in 4QKB
Mn in 4QNJ
Mn in 4QKF
Mn in 4QKN
Mn in 4Q42
Mn in 4Q41
Mn in 4QAX
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy