Atomistry » Chlorine » PDB 7h8x-7i16 » 7hku
Atomistry »
  Chlorine »
    PDB 7h8x-7i16 »
      7hku »

Chlorine in PDB 7hku: Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z291279160 (DNV2_NS5A-X0741)

Protein crystallography data

The structure of Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z291279160 (DNV2_NS5A-X0741), PDB code: 7hku was solved by M.Saini, A.Chopra, J.C.Aschenbrenner, P.G.Marples, B.H.Balcomb, D.Fearon, F.Von Delft, F.X.Ruiz, E.Arnold, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 73.74 / 1.74
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 82.384, 115.686, 147.254, 90, 90, 90
R / Rfree (%) 20 / 24.4

Other elements in 7hku:

The structure of Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z291279160 (DNV2_NS5A-X0741) also contains other interesting chemical elements:

Fluorine (F) 3 atoms
Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z291279160 (DNV2_NS5A-X0741) (pdb code 7hku). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z291279160 (DNV2_NS5A-X0741), PDB code: 7hku:

Chlorine binding site 1 out of 1 in 7hku

Go back to Chlorine Binding Sites List in 7hku
Chlorine binding site 1 out of 1 in the Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z291279160 (DNV2_NS5A-X0741)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z291279160 (DNV2_NS5A-X0741) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1004

b:44.7
occ:1.00
N A:ASN701 3.2 33.8 1.0
O A:HOH1188 3.3 65.2 1.0
N A:ASP702 3.7 42.2 0.5
CE3 A:TRP700 3.8 30.0 1.0
CB A:ASN701 4.0 43.9 1.0
CA A:ASN701 4.0 38.5 1.0
CA A:TRP700 4.0 34.9 1.0
C A:TRP700 4.1 35.8 1.0
CG A:GLN705 4.3 38.2 0.5
C A:ASN701 4.3 40.8 1.0
CB A:GLN705 4.3 36.4 0.5
CB A:ASP702 4.4 48.2 0.5
OD1 A:ASN701 4.4 62.8 1.0
CB A:TRP700 4.4 33.1 1.0
CA A:ASP702 4.6 45.6 0.5
CG A:ASN701 4.6 51.7 1.0
CZ3 A:TRP700 4.6 33.7 1.0
O A:ASP702 4.7 40.1 0.5
CD2 A:TRP700 4.7 29.1 1.0
OE1 A:GLN705 4.8 41.0 0.5

Reference:

M.Saini, A.Chopra, J.C.Aschenbrenner, P.G.Marples, B.H.Balcomb, D.Fearon, F.Von Delft, F.X.Ruiz, E.Arnold. Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 To Be Published.
Page generated: Sun Jul 13 02:53:10 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy