Atomistry » Chlorine » PDB 7hsq-7jho » 7i29
Atomistry »
  Chlorine »
    PDB 7hsq-7jho »
      7i29 »

Chlorine in PDB 7i29: Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z48847594 (DNV2_NS5A-X0162)

Protein crystallography data

The structure of Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z48847594 (DNV2_NS5A-X0162), PDB code: 7i29 was solved by J.C.Aschenbrenner, M.Saini, A.Chopra, P.G.Marples, B.H.Balcomb, R.M.Lithgo, D.Fearon, F.Von Delft, F.X.Ruiz, E.Arnold, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 74.46 / 1.50
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 82.275, 117.416, 148.916, 90, 90, 90
R / Rfree (%) 25.5 / 29.1

Other elements in 7i29:

The structure of Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z48847594 (DNV2_NS5A-X0162) also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z48847594 (DNV2_NS5A-X0162) (pdb code 7i29). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z48847594 (DNV2_NS5A-X0162), PDB code: 7i29:

Chlorine binding site 1 out of 1 in 7i29

Go back to Chlorine Binding Sites List in 7i29
Chlorine binding site 1 out of 1 in the Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z48847594 (DNV2_NS5A-X0162)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 -- Crystal Structure of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 in Complex with Z48847594 (DNV2_NS5A-X0162) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1011

b:38.5
occ:1.00
N A:ASN701 3.3 31.8 1.0
O A:HOH1321 3.6 51.5 1.0
O A:HOH1340 3.6 52.5 0.5
CE3 A:TRP700 3.8 27.2 1.0
N A:ASP702 3.9 35.2 1.0
CG A:GLN705 3.9 36.3 1.0
CB A:GLN705 3.9 30.5 1.0
CA A:TRP700 4.0 27.9 1.0
C A:TRP700 4.1 31.5 1.0
CA A:ASN701 4.1 34.5 1.0
CB A:ASN701 4.2 42.5 1.0
CB A:TRP700 4.3 26.7 1.0
C A:ASN701 4.4 34.0 1.0
OD1 A:ASN701 4.5 60.9 1.0
CZ3 A:TRP700 4.6 31.3 1.0
CB A:ASP702 4.6 41.8 1.0
O A:ASP702 4.7 32.1 1.0
CD2 A:TRP700 4.7 26.4 1.0
CG A:ASN701 4.7 55.0 1.0
CA A:ASP702 4.8 36.4 1.0
CG A:TRP700 5.0 26.6 1.0

Reference:

J.C.Aschenbrenner, M.Saini, A.Chopra, P.G.Marples, B.H.Balcomb, R.M.Lithgo, D.Fearon, F.Von Delft, F.X.Ruiz, E.Arnold. Group Deposition For Crystallographic Fragment Screening of the NS5 Rna-Dependent Rna Polymerase From Dengue Virus Serotype 2 To Be Published.
Page generated: Sun Jul 13 02:54:37 2025

Last articles

Mn in 9LJU
Mn in 9LJW
Mn in 9LJS
Mn in 9LJR
Mn in 9LJT
Mn in 9LJV
Mg in 9UA2
Mg in 9R96
Mg in 9VM1
Mg in 9P01
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy