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Chlorine in PDB 7jm2: Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Apramycin

Protein crystallography data

The structure of Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Apramycin, PDB code: 7jm2 was solved by P.J.Stogios, E.Evdokimova, R.Di Leo, E.Bordeleau, G.D.Wright, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structural Genomics Ofinfectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.92 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 61.730, 107.536, 138.696, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 23.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Apramycin (pdb code 7jm2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Apramycin, PDB code: 7jm2:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7jm2

Go back to Chlorine Binding Sites List in 7jm2
Chlorine binding site 1 out of 2 in the Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Apramycin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Apramycin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:53.1
occ:1.00
O B:HOH624 2.9 55.4 1.0
O B:HOH614 3.4 45.2 1.0
NB4 B:AM2301 3.4 31.1 1.0
CA9 B:AM2301 3.5 31.6 1.0
NA7 B:AM2301 3.6 29.5 1.0
CB5 B:AM2301 3.8 31.4 1.0
CB4 B:AM2301 4.1 31.5 1.0
CB6 B:AM2301 4.3 35.3 1.0
OA8 B:AM2301 4.4 27.3 1.0
CB3 B:AM2301 4.4 30.1 1.0
CA7 B:AM2301 4.5 27.9 1.0
OB1 B:AM2301 5.0 27.7 1.0

Chlorine binding site 2 out of 2 in 7jm2

Go back to Chlorine Binding Sites List in 7jm2
Chlorine binding site 2 out of 2 in the Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Apramycin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Aminoglycoside Resistance Enzyme Apma, Complex with Apramycin within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:60.9
occ:1.00
NB4 C:AM2301 3.4 33.8 1.0
NA7 C:AM2301 3.9 32.2 1.0
CA9 C:AM2301 3.9 32.4 1.0
CB5 C:AM2301 3.9 35.3 1.0
CB4 C:AM2301 4.1 33.6 1.0
CB3 C:AM2301 4.3 31.3 1.0
O C:HOH616 4.4 66.3 1.0
OA8 C:AM2301 4.4 28.6 1.0
O C:HOH569 4.7 59.8 1.0
CB6 C:AM2301 4.8 40.5 1.0
CA7 C:AM2301 4.8 29.7 1.0

Reference:

P.J.Stogios, P.J.Stogios, E.Evdokimova, R.Di Leo, E.Bordeleau, G.D.Wright, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structural Genomics Ofinfectious Diseases (Csgid). N/A N/A.
Page generated: Sun Jul 13 02:58:51 2025

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