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Chlorine in PDB 7kvl: Sars-Cov-2 Main Protease Immature Form - Fmax Library E01 Fragment

Enzymatic activity of Sars-Cov-2 Main Protease Immature Form - Fmax Library E01 Fragment

All present enzymatic activity of Sars-Cov-2 Main Protease Immature Form - Fmax Library E01 Fragment:
3.4.22.69;

Protein crystallography data

The structure of Sars-Cov-2 Main Protease Immature Form - Fmax Library E01 Fragment, PDB code: 7kvl was solved by G.D.Noske, A.M.Nakamura, V.O.Gawriljuk, G.M.A.Lima, A.C.M.Zeri, A.F.Z.Nascimento, R.S.Fernandes, G.Oliva, A.S.Godoy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 72.09 / 2.09
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 67.659, 101.940, 101.950, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 22.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Sars-Cov-2 Main Protease Immature Form - Fmax Library E01 Fragment (pdb code 7kvl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Sars-Cov-2 Main Protease Immature Form - Fmax Library E01 Fragment, PDB code: 7kvl:

Chlorine binding site 1 out of 1 in 7kvl

Go back to Chlorine Binding Sites List in 7kvl
Chlorine binding site 1 out of 1 in the Sars-Cov-2 Main Protease Immature Form - Fmax Library E01 Fragment


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Sars-Cov-2 Main Protease Immature Form - Fmax Library E01 Fragment within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl503

b:58.7
occ:1.00
CL1 A:X4P503 0.0 58.7 1.0
C5 A:X4P503 1.7 48.8 1.0
N2 A:X4P503 2.6 53.4 1.0
C6 A:X4P503 2.7 44.6 1.0
OH A:TYR237 3.5 41.3 1.0
CG A:GLN273 3.8 39.8 1.0
C4 A:X4P503 3.9 39.8 1.0
C2 A:X4P503 4.0 48.6 1.0
OE1 A:GLN273 4.1 51.0 1.0
CB A:GLN273 4.1 35.0 1.0
CD A:GLN273 4.4 43.8 1.0
CA A:GLN273 4.4 38.2 1.0
C3 A:X4P503 4.4 48.5 1.0
O A:HOH691 4.7 47.3 1.0
CZ A:TYR237 4.8 43.3 1.0

Reference:

G.D.Noske, A.M.Nakamura, V.O.Gawriljuk, G.M.A.Lima, A.C.M.Zeri, A.F.Z.Nascimento, R.S.Fernandes, A.S.Godoy. Sars-Cov-2 Main Protease Immature Form - Fmax Library E01 Fragment To Be Published.
Page generated: Sun Jul 13 03:29:09 2025

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