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Chlorine in PDB 7o1p: [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent)

Protein crystallography data

The structure of [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent), PDB code: 7o1p was solved by R.Rohac, L.Martin, L.Liu, D.Basu, L.Tao, R.D.Britt, T.Rauchfuss, Y.Nicolet, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.58
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 52.45, 79.16, 85.76, 90, 90, 90
R / Rfree (%) 17.9 / 24

Other elements in 7o1p:

The structure of [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent) also contains other interesting chemical elements:

Iron (Fe) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent) (pdb code 7o1p). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent), PDB code: 7o1p:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 7o1p

Go back to Chlorine Binding Sites List in 7o1p
Chlorine binding site 1 out of 4 in the [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl409

b:53.4
occ:0.50
CL A:CL409 0.0 53.4 0.5
CL A:CL409 0.7 52.4 0.5
OH A:TYR306 3.2 68.9 1.0
N A:THR269 3.6 53.6 1.0
CB A:THR269 3.8 42.5 1.0
N A:ALA270 3.8 47.2 1.0
CB A:THR268 4.1 48.6 1.0
CE2 A:TYR306 4.1 90.8 1.0
CZ A:TYR306 4.1 63.5 1.0
CA A:THR269 4.1 56.0 1.0
OG1 A:THR269 4.2 83.6 1.0
NH2 A:ARG159 4.3 62.7 1.0
C A:THR269 4.4 61.1 1.0
C A:THR268 4.5 51.7 1.0
CA A:THR268 4.6 45.7 1.0
CB A:ALA270 4.6 41.3 1.0
CA A:ALA270 4.8 43.4 1.0
CG2 A:THR268 4.8 36.6 1.0
OG1 A:THR268 4.9 67.5 1.0

Chlorine binding site 2 out of 4 in 7o1p

Go back to Chlorine Binding Sites List in 7o1p
Chlorine binding site 2 out of 4 in the [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl409

b:52.4
occ:0.50
CL A:CL409 0.0 52.4 0.5
CL A:CL409 0.7 53.4 0.5
CB A:THR268 3.6 48.6 1.0
NH2 A:ARG159 3.6 62.7 1.0
N A:THR269 3.7 53.6 1.0
OH A:TYR306 3.7 68.9 1.0
N A:ALA270 4.0 47.2 1.0
CG2 A:THR268 4.2 36.6 1.0
CA A:THR268 4.3 45.7 1.0
CB A:THR269 4.3 42.5 1.0
C A:THR268 4.4 51.7 1.0
OG1 A:THR268 4.4 67.5 1.0
CE2 A:TYR306 4.4 90.8 1.0
CA A:THR269 4.4 56.0 1.0
CB A:ALA270 4.5 41.3 1.0
CZ A:TYR306 4.6 63.5 1.0
CZ A:ARG159 4.6 51.5 1.0
OG1 A:THR269 4.7 83.6 1.0
C A:THR269 4.7 61.1 1.0
NH1 A:ARG159 4.8 76.4 1.0
CA A:ALA270 4.9 43.4 1.0

Chlorine binding site 3 out of 4 in 7o1p

Go back to Chlorine Binding Sites List in 7o1p
Chlorine binding site 3 out of 4 in the [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl410

b:71.8
occ:1.00
OG1 A:THR134 3.3 51.6 1.0
SD A:MET224 3.4 88.3 0.6
CD A:ARG54 3.4 46.3 1.0
NH2 A:ARG54 3.4 50.4 1.0
CG2 A:THR134 3.8 41.5 1.0
CD A:ARG155 3.9 47.9 1.0
CB A:THR134 4.0 51.7 1.0
NH1 A:ARG155 4.1 73.8 1.0
NE A:ARG54 4.1 73.5 1.0
CZ A:ARG54 4.2 91.1 1.0
CE A:MET224 4.2 67.4 0.4
CG2 A:THR103 4.2 40.2 1.0
CE A:MET291 4.3 60.8 0.4
CG2 A:VAL105 4.3 37.4 1.0
CE A:MET224 4.5 56.7 0.6
CG A:ARG54 4.6 64.9 1.0
NE A:ARG155 4.7 50.2 1.0
CB A:ARG54 4.7 54.9 1.0
CD2 A:LEU157 4.7 43.9 1.0
CG A:MET224 4.7 56.7 0.4
CZ A:ARG155 4.7 62.8 1.0
CB A:ARG155 4.8 59.0 1.0
CG A:MET224 4.9 69.3 0.6
CD1 A:LEU157 4.9 38.5 1.0
SD A:MET224 4.9 57.9 0.4
CG A:ARG155 4.9 63.0 1.0

Chlorine binding site 4 out of 4 in 7o1p

Go back to Chlorine Binding Sites List in 7o1p
Chlorine binding site 4 out of 4 in the [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of [Fefe]-Hydrogenase Maturase Hyde From T. Maritima (C-Ter Stretch Absent) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl411

b:62.3
occ:1.00
ND1 A:HIS52 3.3 69.7 1.0
NH1 A:ARG54 3.4 54.0 1.0
OG1 A:THR103 3.5 64.3 1.0
NE A:ARG54 3.5 73.5 1.0
CZ A:ARG54 3.9 91.1 1.0
CE1 A:HIS52 4.2 128.2 1.0
CG A:HIS52 4.3 70.9 1.0
CB A:HIS52 4.4 47.7 1.0
CB A:LYS102 4.6 55.1 1.0
CB A:THR103 4.7 45.4 1.0
CD A:ARG54 4.7 46.3 1.0
CG A:ARG54 4.8 64.9 1.0
NH2 A:ARG155 4.8 50.2 1.0
C A:LYS102 4.9 50.8 1.0
N A:THR103 5.0 52.9 1.0
O A:LYS102 5.0 69.5 1.0

Reference:

Y.Nicolet, J.K.Rubach, M.C.Posewitz, P.Amara, C.Mathevon, M.Atta, M.Fontecave, J.C.Fontecilla-Camps. X-Ray Structure of the [Fefe]-Hydrogenase Maturase Hyde From Thermotoga Maritima* Journal of Biological V. 283 18861 2008CHEMISTRY.
DOI: 10.1074/JBC.M801161200
Page generated: Sun Jul 13 04:39:48 2025

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