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Chlorine in PDB 7o74: Structure of Cyanase From Pseudomonas Lactis

Enzymatic activity of Structure of Cyanase From Pseudomonas Lactis

All present enzymatic activity of Structure of Cyanase From Pseudomonas Lactis:
4.2.1.104;

Protein crystallography data

The structure of Structure of Cyanase From Pseudomonas Lactis, PDB code: 7o74 was solved by S.Brag, J.H.Driller, B.P.Pedersen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.57 / 1.61
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 130.146, 117.592, 106.991, 90, 94.26, 90
R / Rfree (%) 16.4 / 19

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Cyanase From Pseudomonas Lactis (pdb code 7o74). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 9 binding sites of Chlorine where determined in the Structure of Cyanase From Pseudomonas Lactis, PDB code: 7o74:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9;

Chlorine binding site 1 out of 9 in 7o74

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Chlorine binding site 1 out of 9 in the Structure of Cyanase From Pseudomonas Lactis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Cyanase From Pseudomonas Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:23.8
occ:1.00
 NH2 I:ARG96 3.1 19.3 1.0
OG A:SER122 3.1 23.6 1.0
NE D:ARG96 3.3 18.6 1.0
N A:ALA123 3.3 18.2 1.0
CD D:ARG96 3.6 16.4 1.0
CA A:SER122 3.6 20.9 1.0
CD1 A:ILE120 3.7 21.6 1.0
CG1 A:ILE124 3.8 20.3 1.0
N A:ILE124 3.9 19.1 1.0
CB A:SER122 3.9 23.5 1.0
C A:SER122 4.0 21.5 1.0
CZ I:ARG96 4.1 18.8 1.0
CB A:ILE124 4.2 18.0 1.0
CA A:ALA123 4.2 18.3 1.0
CL J:CL201 4.3 22.0 1.0
NE I:ARG96 4.3 18.7 1.0
CD1 J:ILE120 4.3 21.9 1.0
CZ D:ARG96 4.4 19.0 1.0
C A:ALA123 4.4 21.8 1.0
CB A:ALA123 4.5 19.8 1.0
CG D:ARG96 4.5 15.4 1.0
CD1 A:LEU151 4.6 35.7 1.0
CA A:ILE124 4.7 18.2 1.0
NH2 D:ARG96 4.7 19.4 1.0
N A:SER122 4.9 20.2 1.0
CD1 J:LEU151 4.9 34.0 1.0
OE1 D:GLU99 4.9 22.1 1.0

Chlorine binding site 2 out of 9 in 7o74

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Chlorine binding site 2 out of 9 in the Structure of Cyanase From Pseudomonas Lactis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Cyanase From Pseudomonas Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl201

b:20.6
occ:1.00
 OG B:SER122 3.1 19.5 1.0
NH2 A:ARG96 3.2 16.3 1.0
N B:ALA123 3.3 17.4 1.0
NE F:ARG96 3.3 16.4 1.0
CA B:SER122 3.6 17.7 1.0
CD F:ARG96 3.7 14.2 1.0
CD1 B:ILE120 3.7 18.9 1.0
CB B:SER122 3.8 16.9 1.0
N B:ILE124 3.9 15.4 1.0
CG1 B:ILE124 3.9 19.7 1.0
C B:SER122 4.0 16.2 1.0
CZ A:ARG96 4.2 14.0 1.0
CB B:ILE124 4.2 17.0 1.0
CL D:CL201 4.2 19.8 1.0
CD1 D:ILE120 4.2 19.8 1.0
NE A:ARG96 4.2 16.1 1.0
CA B:ALA123 4.2 14.7 1.0
C B:ALA123 4.4 14.0 1.0
CZ F:ARG96 4.5 14.5 1.0
CG F:ARG96 4.5 13.2 1.0
CB B:ALA123 4.5 15.6 1.0
CA B:ILE124 4.7 15.2 1.0
CD1 B:LEU151 4.7 30.5 1.0
NH2 F:ARG96 4.7 14.5 1.0
CD1 D:LEU151 4.8 32.0 1.0
N B:SER122 4.8 16.0 1.0
OE2 F:GLU99 5.0 21.0 1.0

Chlorine binding site 3 out of 9 in 7o74

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Chlorine binding site 3 out of 9 in the Structure of Cyanase From Pseudomonas Lactis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of Cyanase From Pseudomonas Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl201

b:24.3
occ:1.00
 NH2 J:ARG96 3.1 20.7 1.0
OG C:SER122 3.1 23.9 1.0
NE H:ARG96 3.3 19.4 1.0
N C:ALA123 3.3 18.9 1.0
CD H:ARG96 3.6 18.2 1.0
CA C:SER122 3.6 21.6 1.0
CD1 C:ILE120 3.7 23.9 1.0
CG1 C:ILE124 3.8 22.9 1.0
N C:ILE124 3.9 20.2 1.0
CB C:SER122 3.9 21.8 1.0
C C:SER122 4.0 18.8 1.0
CZ J:ARG96 4.2 21.4 1.0
CB C:ILE124 4.2 16.6 1.0
CA C:ALA123 4.3 20.2 1.0
CD1 I:ILE120 4.3 22.0 1.0
NE J:ARG96 4.3 19.4 1.0
CL I:CL201 4.4 24.2 1.0
CZ H:ARG96 4.4 21.8 1.0
C C:ALA123 4.5 22.6 1.0
CG H:ARG96 4.5 18.7 1.0
CB C:ALA123 4.5 22.1 1.0
CD1 C:LEU151 4.6 37.5 1.0
CA C:ILE124 4.7 20.7 1.0
NH2 H:ARG96 4.7 20.2 1.0
OE1 H:GLU99 4.8 25.5 1.0
N C:SER122 4.8 17.5 1.0
CD1 I:LEU151 5.0 39.6 1.0

Chlorine binding site 4 out of 9 in 7o74

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Chlorine binding site 4 out of 9 in the Structure of Cyanase From Pseudomonas Lactis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Structure of Cyanase From Pseudomonas Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl201

b:19.8
occ:1.00
 OG D:SER122 3.1 17.4 1.0
NH2 F:ARG96 3.2 14.5 1.0
N D:ALA123 3.3 13.2 1.0
NE A:ARG96 3.3 16.1 1.0
CA D:SER122 3.6 16.9 1.0
CD A:ARG96 3.6 18.0 1.0
CD1 D:ILE120 3.7 19.8 1.0
CG1 D:ILE124 3.8 17.7 1.0
N D:ILE124 3.9 16.4 1.0
CB D:SER122 3.9 15.8 1.0
C D:SER122 4.0 16.6 1.0
CZ F:ARG96 4.2 14.5 1.0
CL B:CL201 4.2 20.6 1.0
CA D:ALA123 4.2 16.2 1.0
CD1 B:ILE120 4.2 18.9 1.0
NE F:ARG96 4.2 16.4 1.0
CB D:ILE124 4.2 17.5 1.0
C D:ALA123 4.4 14.7 1.0
CB D:ALA123 4.4 14.9 1.0
CZ A:ARG96 4.5 14.0 1.0
CG A:ARG96 4.5 16.7 1.0
CD1 D:LEU151 4.6 32.0 1.0
CA D:ILE124 4.7 16.3 1.0
NH2 A:ARG96 4.7 16.3 1.0
CD1 B:LEU151 4.8 30.5 1.0
N D:SER122 4.9 15.5 1.0
OE2 A:GLU99 4.9 21.3 1.0

Chlorine binding site 5 out of 9 in 7o74

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Chlorine binding site 5 out of 9 in the Structure of Cyanase From Pseudomonas Lactis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Structure of Cyanase From Pseudomonas Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl201

b:28.4
occ:1.00
 NH2 B:ARG96 3.1 21.4 1.0
OG E:SER122 3.2 21.7 1.0
NE G:ARG96 3.4 24.0 1.0
N E:ALA123 3.4 19.9 1.0
CA E:SER122 3.6 20.0 1.0
CD G:ARG96 3.7 18.7 1.0
CG1 E:ILE124 3.8 31.7 1.0
CB E:SER122 3.9 21.4 1.0
N E:ILE124 4.0 20.4 1.0
C E:SER122 4.0 19.9 1.0
CB E:ILE124 4.1 23.7 1.0
CZ B:ARG96 4.1 21.7 1.0
CD1 E:LEU151 4.2 33.9 1.0
CD1 E:ILE120 4.2 26.1 1.0
CD2 F:LEU151 4.3 32.0 1.0
OE2 G:GLU99 4.3 24.2 1.0
NE B:ARG96 4.3 24.2 1.0
CA E:ALA123 4.4 20.1 1.0
CZ G:ARG96 4.5 20.4 1.0
CG G:ARG96 4.5 18.4 1.0
C E:ALA123 4.6 20.4 1.0
CA E:ILE124 4.7 25.4 1.0
CB E:ALA123 4.7 21.8 1.0
NH2 G:ARG96 4.7 26.4 1.0
N E:SER122 4.8 17.5 1.0
CD1 F:ILE120 5.0 25.4 1.0
O E:ILE121 5.0 20.4 1.0

Chlorine binding site 6 out of 9 in 7o74

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Chlorine binding site 6 out of 9 in the Structure of Cyanase From Pseudomonas Lactis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Structure of Cyanase From Pseudomonas Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Cl201

b:23.9
occ:1.00
 OG G:SER122 3.0 20.3 1.0
NH2 C:ARG96 3.1 21.8 1.0
N G:ALA123 3.3 19.1 1.0
NE E:ARG96 3.3 18.7 1.0
CA G:SER122 3.6 20.0 1.0
CD E:ARG96 3.7 16.2 1.0
CD1 G:ILE120 3.7 22.3 1.0
CB G:SER122 3.8 21.6 1.0
CG1 G:ILE124 3.8 22.7 1.0
N G:ILE124 3.9 22.5 1.0
C G:SER122 4.0 19.2 1.0
CZ C:ARG96 4.1 19.7 1.0
CB G:ILE124 4.2 23.8 1.0
CL H:CL201 4.2 23.4 1.0
CD1 H:ILE120 4.2 22.7 1.0
NE C:ARG96 4.2 19.6 1.0
CA G:ALA123 4.2 19.3 1.0
C G:ALA123 4.4 19.8 1.0
CZ E:ARG96 4.5 19.6 1.0
CG E:ARG96 4.5 16.2 1.0
CB G:ALA123 4.5 18.9 1.0
CD1 G:LEU151 4.5 32.1 1.0
CA G:ILE124 4.7 18.4 1.0
NH2 E:ARG96 4.7 17.2 1.0
CD1 H:LEU151 4.8 32.9 1.0
N G:SER122 4.9 18.1 1.0
OE2 E:GLU99 4.9 23.2 1.0

Chlorine binding site 7 out of 9 in 7o74

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Chlorine binding site 7 out of 9 in the Structure of Cyanase From Pseudomonas Lactis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Structure of Cyanase From Pseudomonas Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cl201

b:23.4
occ:1.00
 OG H:SER122 3.0 22.2 1.0
NH2 E:ARG96 3.1 17.2 1.0
N H:ALA123 3.3 17.1 1.0
NE C:ARG96 3.3 19.6 1.0
CD1 H:ILE120 3.6 22.7 1.0
CD C:ARG96 3.6 19.3 1.0
CA H:SER122 3.6 23.4 1.0
CB H:SER122 3.8 22.4 1.0
CG1 H:ILE124 3.8 24.9 1.0
N H:ILE124 3.8 18.6 1.0
C H:SER122 4.0 22.0 1.0
CZ E:ARG96 4.1 19.6 1.0
CD1 G:ILE120 4.2 22.3 1.0
CB H:ILE124 4.2 21.2 1.0
CL G:CL201 4.2 23.9 1.0
NE E:ARG96 4.2 18.7 1.0
CA H:ALA123 4.2 16.9 1.0
C H:ALA123 4.4 22.5 1.0
CZ C:ARG96 4.4 19.7 1.0
CB H:ALA123 4.5 16.5 1.0
CG C:ARG96 4.5 16.4 1.0
CA H:ILE124 4.7 18.9 1.0
NH2 C:ARG96 4.7 21.8 1.0
CD1 G:LEU151 4.8 32.1 1.0
OE1 C:GLU99 4.8 25.1 1.0
N H:SER122 4.9 18.4 1.0
CD1 H:LEU151 5.0 32.9 1.0

Chlorine binding site 8 out of 9 in 7o74

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Chlorine binding site 8 out of 9 in the Structure of Cyanase From Pseudomonas Lactis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Structure of Cyanase From Pseudomonas Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Cl201

b:24.2
occ:1.00
 OG I:SER122 3.0 21.7 1.0
NH2 H:ARG96 3.2 20.2 1.0
N I:ALA123 3.3 18.3 1.0
NE J:ARG96 3.3 19.4 1.0
CA I:SER122 3.6 16.6 1.0
CD1 I:ILE120 3.6 22.0 1.0
CD J:ARG96 3.6 18.7 1.0
CG1 I:ILE124 3.8 22.0 1.0
CB I:SER122 3.9 20.2 1.0
N I:ILE124 3.9 19.9 1.0
C I:SER122 3.9 18.9 1.0
CZ H:ARG96 4.2 21.8 1.0
CB I:ILE124 4.2 21.9 1.0
CA I:ALA123 4.2 17.3 1.0
CD1 C:ILE120 4.3 23.9 1.0
NE H:ARG96 4.3 19.4 1.0
CL C:CL201 4.4 24.3 1.0
CG J:ARG96 4.4 15.2 1.0
CZ J:ARG96 4.4 21.4 1.0
C I:ALA123 4.4 20.1 1.0
CB I:ALA123 4.5 15.8 1.0
CD1 I:LEU151 4.7 39.6 1.0
CA I:ILE124 4.7 18.8 1.0
NH2 J:ARG96 4.7 20.7 1.0
N I:SER122 4.8 19.2 1.0
OE2 J:GLU99 4.9 24.3 1.0
O I:ILE121 4.9 19.3 1.0
CD1 C:LEU151 5.0 37.5 1.0

Chlorine binding site 9 out of 9 in 7o74

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Chlorine binding site 9 out of 9 in the Structure of Cyanase From Pseudomonas Lactis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Structure of Cyanase From Pseudomonas Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Cl201

b:22.0
occ:1.00
 OG J:SER122 3.2 19.4 1.0
NH2 D:ARG96 3.2 19.4 1.0
N J:ALA123 3.3 15.3 1.0
NE I:ARG96 3.3 18.7 1.0
CA J:SER122 3.6 16.4 1.0
CD1 J:ILE120 3.6 21.9 1.0
CD I:ARG96 3.7 17.1 1.0
CG1 J:ILE124 3.7 22.3 1.0
N J:ILE124 3.9 16.7 1.0
CB J:SER122 3.9 17.2 1.0
C J:SER122 4.0 19.1 1.0
CD1 A:ILE120 4.1 21.6 1.0
CB J:ILE124 4.2 16.8 1.0
CZ D:ARG96 4.2 19.0 1.0
CA J:ALA123 4.2 19.5 1.0
NE D:ARG96 4.3 18.6 1.0
CL A:CL201 4.3 23.8 1.0
CZ I:ARG96 4.4 18.8 1.0
C J:ALA123 4.4 16.3 1.0
CG I:ARG96 4.5 15.6 1.0
CB J:ALA123 4.5 19.9 1.0
NH2 I:ARG96 4.6 19.3 1.0
CA J:ILE124 4.7 20.7 1.0
CD1 J:LEU151 4.8 34.0 1.0
N J:SER122 4.9 15.2 1.0
OE2 I:GLU99 5.0 21.9 1.0

Reference:

S.Brag, J.H.Driller, B.P.Pedersen. Structure Determination and Analysis of Unintentionally Crystallized Cyanase From Pseudomonas Lactis To Be Published.
Page generated: Sun Jul 13 04:47:27 2025

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