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Chlorine in PDB 7ol7: Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form

Enzymatic activity of Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form

All present enzymatic activity of Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form:
3.2.1.17;

Protein crystallography data

The structure of Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form, PDB code: 7ol7 was solved by A.Camara-Artigas, M.C.Salinas-Garcia, M.Plaza-Garrido, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.05 / 1.15
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 78.547, 78.547, 37.332, 90, 90, 90
R / Rfree (%) 15.4 / 17.4

Other elements in 7ol7:

The structure of Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form also contains other interesting chemical elements:

Sodium (Na) 1 atom
Fluorine (F) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form (pdb code 7ol7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form, PDB code: 7ol7:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 7ol7

Go back to Chlorine Binding Sites List in 7ol7
Chlorine binding site 1 out of 5 in the Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:27.4
occ:1.00
 H A:GLY26 2.4 19.7 1.0
HG A:SER24 2.7 26.5 1.0
HA A:GLN121 2.8 27.6 1.0
HA3 A:GLY26 2.9 20.6 1.0
HB2 A:SER24 3.0 24.1 1.0
OG A:SER24 3.1 22.1 1.0
N A:GLY26 3.2 16.4 1.0
HG23 A:VAL120 3.3 27.6 1.0
HD13 A:ILE124 3.4 35.6 1.0
CA A:GLY26 3.5 17.2 1.0
CB A:SER24 3.5 20.1 1.0
HB2 A:GLN121 3.6 31.5 1.0
HD11 A:ILE124 3.6 35.6 1.0
CA A:GLN121 3.6 23.0 1.0
HG12 A:ILE124 3.6 31.9 1.0
HG2 A:GLN121 3.8 38.9 1.0
CD1 A:ILE124 3.9 29.7 1.0
N A:GLN121 3.9 21.9 1.0
CB A:GLN121 4.0 26.2 1.0
H A:ASN27 4.1 18.5 1.0
HA2 A:GLY26 4.1 20.6 1.0
HB3 A:SER24 4.2 24.1 1.0
H A:LEU25 4.2 21.3 1.0
C A:VAL120 4.2 19.7 1.0
O A:VAL120 4.3 19.0 1.0
H A:GLN121 4.3 26.3 1.0
N A:LEU25 4.3 17.8 1.0
CG2 A:VAL120 4.3 23.0 1.0
CG A:GLN121 4.3 32.4 1.0
CG1 A:ILE124 4.3 26.6 1.0
C A:LEU25 4.4 16.1 1.0
C A:SER24 4.4 17.0 1.0
HG3 A:GLN121 4.4 38.9 1.0
HB3 A:LEU25 4.4 22.1 1.0
HG21 A:VAL120 4.5 27.6 1.0
C A:GLY26 4.5 14.8 1.0
HG23 A:ILE124 4.6 28.3 1.0
N A:ASN27 4.6 15.4 1.0
CA A:SER24 4.6 17.3 1.0
CA A:LEU25 4.8 16.9 1.0
HD12 A:ILE124 4.8 35.6 1.0
HG22 A:VAL120 4.8 27.6 1.0
O A:SER24 4.8 18.5 1.0
HB A:VAL120 4.8 24.2 1.0
C A:GLN121 4.8 20.5 1.0
HG13 A:ILE124 4.9 31.9 1.0
HB3 A:GLN121 4.9 31.5 1.0
HG21 A:ILE124 4.9 28.3 1.0
HD22 A:ASN27 5.0 19.7 1.0

Chlorine binding site 2 out of 5 in 7ol7

Go back to Chlorine Binding Sites List in 7ol7
Chlorine binding site 2 out of 5 in the Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:21.7
occ:1.00
 HH A:TYR23 2.4 18.9 1.0
OH A:TYR23 3.0 15.7 1.0
O A:HOH405 3.1 37.6 1.0
HE2 A:TYR23 3.2 17.4 1.0
O A:HOH343 3.2 19.3 1.0
HA3 A:GLY104 3.5 19.8 1.0
CZ A:TYR23 3.6 14.3 1.0
CE2 A:TYR23 3.6 14.5 1.0
HA2 A:GLY104 4.3 19.8 1.0
CA A:GLY104 4.3 16.5 1.0
O A:ARG21 4.6 18.1 1.0
CE1 A:TYR23 4.8 15.3 1.0
H A:MET105 4.8 17.2 1.0
CD2 A:TYR23 4.9 15.0 1.0
N A:GLY104 4.9 17.1 1.0

Chlorine binding site 3 out of 5 in 7ol7

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Chlorine binding site 3 out of 5 in the Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:46.7
occ:1.00
 H A:ILE88 2.4 22.4 1.0
HG12 A:ILE88 2.6 21.8 1.0
HA A:ASP87 2.9 24.6 1.0
N A:ILE88 3.2 18.7 1.0
HZ A:PHE3 3.4 23.8 1.0
HB1 A:ALA11 3.5 24.0 1.0
HG23 A:ILE88 3.5 23.3 1.0
CG1 A:ILE88 3.6 18.2 1.0
O A:HOH304 3.6 31.1 1.0
O A:HOH362 3.6 40.4 1.0
CA A:ASP87 3.8 20.5 1.0
NE2 A:HIS15 3.8 28.5 1.0
HG13 A:ILE88 3.9 21.8 1.0
C A:ASP87 4.0 19.1 1.0
HH21 A:ARG14 4.0 51.5 1.0
O A:SER86 4.1 20.4 0.6
O A:SER86 4.1 21.3 0.4
OD1 A:ASP87 4.1 26.9 1.0
CG A:ASP87 4.1 29.2 1.0
CB A:ILE88 4.2 18.1 1.0
CA A:ILE88 4.2 16.5 1.0
HB2 A:ALA11 4.3 24.0 1.0
CG2 A:ILE88 4.3 19.4 1.0
CB A:ALA11 4.3 20.0 1.0
CZ A:PHE3 4.3 19.8 1.0
HD2 A:HIS15 4.4 32.5 1.0
CD2 A:HIS15 4.5 27.1 1.0
OD2 A:ASP87 4.5 37.2 1.0
H A:THR89 4.5 21.6 1.0
HD13 A:ILE88 4.5 24.7 1.0
HE2 A:PHE3 4.5 22.9 1.0
CB A:ASP87 4.5 25.1 1.0
CD1 A:ILE88 4.5 20.6 1.0
NH2 A:ARG14 4.6 42.9 1.0
HD11 A:ILE88 4.6 24.7 1.0
HH22 A:ARG14 4.6 51.5 1.0
HG21 A:ILE88 4.7 23.3 1.0
CE1 A:HIS15 4.8 26.2 1.0
HG1 A:THR89 4.8 29.4 1.0
HB3 A:ALA11 4.8 24.0 1.0
N A:ASP87 4.8 19.9 1.0
HB2 A:ASP87 4.8 30.1 1.0
CE2 A:PHE3 4.9 19.1 1.0
C A:SER86 4.9 19.8 0.6
C A:SER86 4.9 20.2 0.4
HE1 A:HIS15 4.9 31.5 1.0
N A:THR89 4.9 18.0 1.0
HA A:ILE88 5.0 19.8 1.0
C A:ILE88 5.0 16.5 1.0
HG22 A:ILE88 5.0 23.3 1.0

Chlorine binding site 4 out of 5 in 7ol7

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Chlorine binding site 4 out of 5 in the Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:22.6
occ:1.00
 H A:THR69 2.3 19.9 1.0
N A:THR69 3.1 16.6 1.0
O A:HOH373 3.2 16.4 1.0
O A:HOH409 3.2 31.9 1.0
O A:THR69 3.2 19.1 1.0
HA2 A:GLY67 3.3 21.2 1.0
O A:HOH420 3.3 31.0 1.0
H A:GLY67 3.3 19.8 1.0
O A:HOH345 3.4 37.3 1.0
H A:ARG68 3.5 18.8 1.0
N A:ARG68 3.5 15.7 1.0
C A:GLY67 3.5 17.7 1.0
C A:THR69 3.6 16.8 1.0
HB A:THR69 3.6 18.6 1.0
CA A:GLY67 3.6 17.7 1.0
OD1 A:ASN65 3.7 19.8 1.0
OG A:SER72 3.7 21.2 1.0
N A:GLY67 3.7 16.5 1.0
CA A:THR69 3.8 16.0 1.0
O A:HOH391 4.0 20.5 1.0
O A:GLY67 4.2 20.6 1.0
C A:ARG68 4.2 18.2 1.0
CB A:THR69 4.2 15.5 1.0
H A:ASP66 4.2 16.8 1.0
OD1 A:ASP66 4.3 14.5 1.0
CA A:ARG68 4.3 17.5 1.0
HA A:PRO70 4.3 27.8 1.0
HG1 A:THR69 4.4 18.1 1.0
N A:PRO70 4.4 19.1 1.0
HA A:ARG68 4.5 21.0 1.0
HA3 A:GLY67 4.6 21.2 1.0
H A:SER72 4.6 27.6 1.0
HA A:THR69 4.7 19.2 1.0
NA A:NA206 4.7 19.1 1.0
OG1 A:THR69 4.8 15.1 1.0
C A:ASP66 4.8 14.6 1.0
CA A:PRO70 4.9 23.2 1.0
HA A:ASN65 4.9 17.9 1.0
N A:ASP66 4.9 14.0 1.0
CG A:ASN65 4.9 18.3 1.0
O A:HOH354 4.9 24.6 0.5
CB A:SER72 4.9 21.7 1.0
HB3 A:SER72 4.9 26.1 1.0

Chlorine binding site 5 out of 5 in 7ol7

Go back to Chlorine Binding Sites List in 7ol7
Chlorine binding site 5 out of 5 in the Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Lysozyme in Complex with Trifluoroethanol: Tetragonal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:35.9
occ:1.00
 HE2 A:PHE38 2.8 19.4 1.0
HZ3 A:LYS33 2.8 33.2 1.0
HZ3 A:TRP123 3.1 27.3 1.0
HB2 A:ARG5 3.3 24.7 1.0
HD3 A:ARG5 3.3 26.8 1.0
O A:HOH412 3.5 36.9 1.0
HD3 A:LYS33 3.5 24.0 1.0
CE2 A:PHE38 3.7 16.2 1.0
NZ A:LYS33 3.7 27.7 1.0
HE2 A:LYS33 4.0 28.5 1.0
CZ3 A:TRP123 4.0 22.7 1.0
HZ1 A:LYS33 4.1 33.2 1.0
CB A:ARG5 4.2 20.6 1.0
CE A:LYS33 4.2 23.8 1.0
CD A:ARG5 4.2 22.3 1.0
HZ A:PHE38 4.2 19.6 1.0
HZ2 A:LYS33 4.2 33.2 1.0
CD A:LYS33 4.3 20.0 1.0
HE A:ARG5 4.4 28.1 1.0
CZ A:PHE38 4.4 16.4 1.0
HB3 A:ARG5 4.5 24.7 1.0
HD2 A:PHE38 4.6 18.4 1.0
CD2 A:PHE38 4.6 15.3 1.0
HG3 A:ARG5 4.6 25.1 1.0
HE3 A:TRP123 4.6 22.6 1.0
CG A:ARG5 4.6 20.9 1.0
NE A:ARG5 4.8 23.4 1.0
HH2 A:TRP123 4.8 27.8 1.0
CE3 A:TRP123 4.8 18.9 1.0
HD2 A:LYS33 4.8 24.0 1.0
HD2 A:ARG5 4.9 26.8 1.0
CH2 A:TRP123 4.9 23.1 1.0
H A:ARG5 4.9 23.8 1.0

Reference:

A.Camara-Artigas, M.C.Salinas-Garcia, M.Plaza-Garrido. Crystal Structure of Lysozyme in Complex with Tfe To Be Published.
Page generated: Sun Jul 13 05:16:10 2025

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