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Chlorine in PDB 7oyi: Escherichia Coli YTFE_E159L(Mn)

Protein crystallography data

The structure of Escherichia Coli YTFE_E159L(Mn), PDB code: 7oyi was solved by L.S.O.Silva, P.Matias, C.V.Romao, L.M.Saraiva, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 53.39 / 1.86
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 59.824, 49.671, 88.091, 90, 100.48, 90
R / Rfree (%) 18.1 / 20.5

Other elements in 7oyi:

The structure of Escherichia Coli YTFE_E159L(Mn) also contains other interesting chemical elements:

Manganese (Mn) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Escherichia Coli YTFE_E159L(Mn) (pdb code 7oyi). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Escherichia Coli YTFE_E159L(Mn), PDB code: 7oyi:

Chlorine binding site 1 out of 1 in 7oyi

Go back to Chlorine Binding Sites List in 7oyi
Chlorine binding site 1 out of 1 in the Escherichia Coli YTFE_E159L(Mn)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Escherichia Coli YTFE_E159L(Mn) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl306

b:41.2
occ:1.00
HH22 A:ARG43 2.0 83.4 1.0
H A:ASP28 2.3 30.2 1.0
HE22 A:GLN35 2.4 49.9 1.0
NH2 A:ARG43 2.8 69.5 1.0
HA A:MET27 2.9 36.4 1.0
HH21 A:ARG43 3.1 83.4 1.0
NE2 A:GLN35 3.1 41.6 1.0
HZ3 A:LYS44 3.1 84.1 1.0
N A:ASP28 3.2 25.1 1.0
HE21 A:GLN35 3.5 49.9 1.0
HB2 A:ALA40 3.5 41.5 1.0
HB3 A:ASP28 3.6 36.4 1.0
HH12 A:ARG43 3.7 119.3 1.0
HZ1 A:LYS44 3.7 84.1 1.0
CA A:MET27 3.7 30.3 1.0
NZ A:LYS44 3.8 70.0 1.0
HB3 A:MET27 3.8 32.0 1.0
CD A:GLN35 3.9 46.6 1.0
CZ A:ARG43 3.9 82.0 1.0
C A:MET27 3.9 30.7 1.0
HG2 A:MET27 4.0 37.2 1.0
OE1 A:GLN35 4.0 47.0 1.0
HB2 A:ASP28 4.0 36.4 1.0
HB3 A:ALA40 4.0 41.5 1.0
HZ2 A:LYS44 4.1 84.1 1.0
CB A:ASP28 4.1 30.3 1.0
NH1 A:ARG43 4.1 99.4 1.0
CA A:ASP28 4.2 30.0 1.0
HD13 A:LEU8 4.2 44.3 1.0
CB A:ALA40 4.2 34.5 1.0
CB A:MET27 4.2 26.6 1.0
HA A:ALA40 4.2 43.1 1.0
O A:ASP26 4.4 33.1 1.0
HD11 A:LEU8 4.6 44.3 1.0
CG A:MET27 4.6 31.0 1.0
O A:ASP28 4.7 33.5 1.0
CD1 A:LEU8 4.7 36.9 1.0
C A:ASP28 4.7 32.9 1.0
CA A:ALA40 4.8 35.9 1.0
HD12 A:LEU8 4.8 44.3 1.0
HG3 A:LYS44 4.8 60.8 1.0
N A:MET27 4.9 26.5 1.0
HD2 A:LYS44 4.9 61.6 1.0
HA A:ASP28 5.0 36.1 1.0
CE A:LYS44 5.0 50.0 1.0
HH11 A:ARG43 5.0 119.3 1.0

Reference:

L.S.O.Silva, P.M.Matias, C.V.Romao, L.M.Saraiva. Repair of Iron Center Proteins-A Different Class of Hemerythrin-Like Proteins. Molecules V. 27 2022.
ISSN: ESSN 1420-3049
PubMed: 35807291
DOI: 10.3390/MOLECULES27134051
Page generated: Sun Jul 13 05:29:18 2025

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