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Chlorine in PDB 7q7v: Crystal Structure of Human BCL6 Btb Domain in Complex with Compound 12A

Protein crystallography data

The structure of Crystal Structure of Human BCL6 Btb Domain in Complex with Compound 12A, PDB code: 7q7v was solved by M.J.Rodrigues, Y.-V.Le Bihan, R.L.M.Van Montfort, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.63 / 1.81
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 67.307, 67.307, 166.807, 90, 90, 120
R / Rfree (%) 18.5 / 20.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human BCL6 Btb Domain in Complex with Compound 12A (pdb code 7q7v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human BCL6 Btb Domain in Complex with Compound 12A, PDB code: 7q7v:

Chlorine binding site 1 out of 1 in 7q7v

Go back to Chlorine Binding Sites List in 7q7v
Chlorine binding site 1 out of 1 in the Crystal Structure of Human BCL6 Btb Domain in Complex with Compound 12A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human BCL6 Btb Domain in Complex with Compound 12A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:29.6
occ:0.29
CL A:9GR201 0.0 29.6 0.3
C A:9GR201 1.7 29.6 1.0
N4 A:9GR201 2.6 30.7 1.0
C1 A:9GR201 2.7 28.3 1.0
C2 A:9GR201 3.0 27.2 1.0
N A:9GR201 3.6 27.1 1.0
CE1 A:TYR58 3.7 34.6 1.0
C21 A:9GR201 3.8 30.8 1.0
C3 A:9GR201 3.9 28.6 1.0
OH A:TYR58 4.1 40.9 1.0
CZ A:TYR58 4.2 37.3 1.0
C20 A:9GR201 4.4 29.8 1.0
CD1 A:TYR58 4.6 32.9 1.0

Reference:

O.A.Davis, K.J.Cheung, A.Brennan, M.G.Lloyd, M.J.Rodrigues, O.A.Pierrat, G.W.Collie, Y.V.Le Bihan, R.Huckvale, A.C.Harnden, A.Varela, M.D.Bright, P.Eve, A.Hayes, A.T.Henley, M.D.Carter, P.C.Mcandrew, R.Talbot, R.Burke, R.L.M.Van Montfort, F.I.Raynaud, O.W.Rossanese, M.Meniconi, B.R.Bellenie, S.Hoelder. Optimizing Shape Complementarity Enables the Discovery of Potent Tricyclic BCL6 Inhibitors. J.Med.Chem. V. 65 8169 2022.
ISSN: ISSN 0022-2623
PubMed: 35657291
DOI: 10.1021/ACS.JMEDCHEM.1C02174
Page generated: Sun Jul 13 06:15:36 2025

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