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Chlorine in PDB 7qkb: Crystal Structure of Human Cathepsin L in Complex with Covalently Bound GC376

Protein crystallography data

The structure of Crystal Structure of Human Cathepsin L in Complex with Covalently Bound GC376, PDB code: 7qkb was solved by P.Y.A.Reinke, S.Falke, J.Lieske, W.Ewert, J.Loboda, A.Rahmani Mashhour, M.Hauser, K.Karnicar, A.Usenik, N.Lindic, M.Lach, H.Boehler, T.Beck, R.Cox, H.N.Chapman, W.Hinrichs, D.Turk, S.Guenther, A.Meents, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.25 / 1.80
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 57.29, 62.45, 67.82, 105.31, 93.52, 115.93
R / Rfree (%) 16.9 / 20.3

Other elements in 7qkb:

The structure of Crystal Structure of Human Cathepsin L in Complex with Covalently Bound GC376 also contains other interesting chemical elements:

Sodium (Na) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Cathepsin L in Complex with Covalently Bound GC376 (pdb code 7qkb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human Cathepsin L in Complex with Covalently Bound GC376, PDB code: 7qkb:

Chlorine binding site 1 out of 1 in 7qkb

Go back to Chlorine Binding Sites List in 7qkb
Chlorine binding site 1 out of 1 in the Crystal Structure of Human Cathepsin L in Complex with Covalently Bound GC376


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Cathepsin L in Complex with Covalently Bound GC376 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:77.1
occ:1.00
HH12 A:ARG206 2.5 80.3 1.0
NH1 A:ARG206 3.2 66.9 1.0
HH11 A:ARG206 3.5 80.3 1.0
HH22 A:ARG206 4.0 85.5 1.0
CZ A:ARG206 4.2 70.1 1.0
NH2 A:ARG206 4.5 71.2 1.0

Reference:

P.Y.A.Reinke, S.Falke, J.Lieske, W.Ewert, J.Loboda, A.Rahmani Mashhour, M.Hauser, K.Karnicar, A.Usenik, N.Lindic, M.Lach, H.Boehler, T.Beck, R.Cox, H.N.Chapman, W.Hinrichs, D.Turk, S.Guenther, A.Meents. Sulfonated Calpeptin Is A Promising Drug Candidate Against Sars-Cov-2 Infections To Be Published.
Page generated: Sun Jul 13 06:22:27 2025

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