Atomistry » Chlorine » PDB 7rhm-7rrn » 7rp4
Atomistry »
  Chlorine »
    PDB 7rhm-7rrn »
      7rp4 »

Chlorine in PDB 7rp4: Crystal Structure of Kras G12C in Complex with Gne-1952

Enzymatic activity of Crystal Structure of Kras G12C in Complex with Gne-1952

All present enzymatic activity of Crystal Structure of Kras G12C in Complex with Gne-1952:
3.6.5.2;

Protein crystallography data

The structure of Crystal Structure of Kras G12C in Complex with Gne-1952, PDB code: 7rp4 was solved by A.Oh, C.Tam, W.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.01 / 2.15
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 33.586, 43.985, 65.305, 88.97, 84.94, 80.01
R / Rfree (%) 21.3 / 25.3

Other elements in 7rp4:

The structure of Crystal Structure of Kras G12C in Complex with Gne-1952 also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Kras G12C in Complex with Gne-1952 (pdb code 7rp4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Kras G12C in Complex with Gne-1952, PDB code: 7rp4:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7rp4

Go back to Chlorine Binding Sites List in 7rp4
Chlorine binding site 1 out of 2 in the Crystal Structure of Kras G12C in Complex with Gne-1952


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Kras G12C in Complex with Gne-1952 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:31.0
occ:1.00
CL A:MKZ201 0.0 31.0 1.0
C18 A:MKZ201 1.7 29.4 1.0
C19 A:MKZ201 2.7 29.2 1.0
C9 A:MKZ201 2.7 29.4 1.0
C10 A:MKZ201 3.0 30.2 1.0
NE A:ARG68 3.5 40.2 1.0
C11 A:MKZ201 3.5 31.3 1.0
C17 A:MKZ201 3.6 31.2 1.0
CE A:MET72 3.6 37.9 1.0
CD A:ARG68 3.6 41.0 1.0
CZ A:ARG68 3.7 39.4 1.0
C12 A:MKZ201 3.9 30.9 1.0
NH1 A:ARG68 4.0 39.1 1.0
C20 A:MKZ201 4.0 31.2 1.0
C8 A:MKZ201 4.0 30.0 1.0
C16 A:MKZ201 4.1 32.6 1.0
CG A:ARG68 4.3 41.1 1.0
CB A:THR58 4.3 21.8 1.0
CG2 A:THR58 4.3 21.6 1.0
NH2 A:ARG68 4.3 38.0 1.0
OE2 A:GLU37 4.4 50.2 1.0
C13 A:MKZ201 4.4 32.0 1.0
C15 A:MKZ201 4.5 31.8 1.0
C7 A:MKZ201 4.5 31.5 1.0
O A:HOH337 4.5 16.4 1.0
CB A:ARG68 4.6 43.0 1.0
OG1 A:THR58 4.7 20.9 1.0
C14 A:MKZ201 4.9 32.2 1.0

Chlorine binding site 2 out of 2 in 7rp4

Go back to Chlorine Binding Sites List in 7rp4
Chlorine binding site 2 out of 2 in the Crystal Structure of Kras G12C in Complex with Gne-1952


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Kras G12C in Complex with Gne-1952 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl201

b:34.2
occ:1.00
CL B:MKZ201 0.0 34.2 1.0
C18 B:MKZ201 1.7 33.2 1.0
C19 B:MKZ201 2.7 34.2 1.0
C9 B:MKZ201 2.7 32.6 1.0
C10 B:MKZ201 3.1 29.3 1.0
CD B:ARG68 3.5 40.3 1.0
CE B:MET72 3.5 39.3 1.0
C11 B:MKZ201 3.6 28.9 1.0
NE B:ARG68 3.6 42.9 1.0
C17 B:MKZ201 3.7 30.5 1.0
CZ B:ARG68 3.8 43.9 1.0
NH1 B:ARG68 3.8 30.1 1.0
C12 B:MKZ201 3.9 27.4 1.0
CG2 B:THR58 4.0 25.9 1.0
C20 B:MKZ201 4.0 36.2 1.0
C8 B:MKZ201 4.0 34.3 1.0
CB B:THR58 4.1 26.1 1.0
C16 B:MKZ201 4.2 31.8 1.0
CB B:ARG68 4.4 41.3 1.0
O B:HOH336 4.4 16.4 1.0
C7 B:MKZ201 4.5 36.7 1.0
NH2 B:ARG68 4.5 42.9 1.0
C13 B:MKZ201 4.6 29.0 1.0
CG B:ARG68 4.6 40.6 1.0
C15 B:MKZ201 4.6 31.0 1.0
OG1 B:THR58 4.7 25.5 1.0
OE1 B:GLU37 4.9 31.5 1.0

Reference:

C.W.Davies, A.J.Oh, R.Mroue, M.Steffek, J.M.Bruning, Y.Xiao, S.Feng, S.Jayakar, E.Chan, V.Arumugam, S.C.Uribe, J.Drummond, A.Frommlet, C.Lu, Y.Franke, M.Merchant, H.Koeppen, J.G.Quinn, S.Malhotra, S.Do, L.Gazzard, H.E.Purkey, J.Rudolph, M.M.Mulvihill, J.T.Koerber, W.Wang, M.Evangelista. Conformation-Locking Antibodies For the Discovery and Characterization of Kras Inhibitors. Nat.Biotechnol. V. 40 769 2022.
ISSN: ISSN 1087-0156
PubMed: 34992247
DOI: 10.1038/S41587-021-01126-9
Page generated: Sun Jul 13 06:47:29 2025

Last articles

Mn in 9LJU
Mn in 9LJW
Mn in 9LJS
Mn in 9LJR
Mn in 9LJT
Mn in 9LJV
Mg in 9UA2
Mg in 9R96
Mg in 9VM1
Mg in 9P01
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy