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Chlorine in PDB 7ruw: Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-7859

Protein crystallography data

The structure of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-7859, PDB code: 7ruw was solved by D.A.Kuntz, G.G.Prive, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.82 / 1.30
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 30.33, 72.133, 55.493, 90, 107.14, 90
R / Rfree (%) 14 / 16.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-7859 (pdb code 7ruw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-7859, PDB code: 7ruw:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7ruw

Go back to Chlorine Binding Sites List in 7ruw
Chlorine binding site 1 out of 2 in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-7859


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-7859 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:15.9
occ:1.00
CL21 A:7RR201 0.0 15.9 1.0
C20 A:7RR201 1.7 15.1 1.0
H141 A:7RR201 2.6 17.8 1.0
C19 A:7RR201 2.7 18.1 1.0
C15 A:7RR201 2.7 16.8 1.0
H191 A:7RR201 2.8 21.8 1.0
HA A:ALA52 2.8 15.2 1.0
N14 A:7RR201 3.0 14.7 1.0
HD1 A:TYR58 3.1 18.7 1.0
HB3 A:MET51 3.2 15.0 1.0
O A:MET51 3.2 13.2 1.0
C A:MET51 3.5 10.9 1.0
N A:ALA52 3.6 11.1 1.0
CA A:ALA52 3.6 12.6 1.0
HB2 A:MET51 3.7 15.0 1.0
HE1 A:TYR58 3.8 22.0 1.0
CD1 A:TYR58 3.8 15.5 1.0
CB A:MET51 3.8 12.4 1.0
N18 A:7RR201 3.9 19.6 1.0
C16 A:7RR201 4.0 18.9 1.0
HE2 A:MET51 4.0 22.3 1.0
HB2 A:ALA52 4.0 17.4 1.0
H A:ALA52 4.1 13.4 1.0
CE1 A:TYR58 4.2 18.2 1.0
CA A:MET51 4.3 11.4 1.0
C13 A:7RR201 4.3 15.8 1.0
CB A:ALA52 4.4 14.5 1.0
C17 A:7RR201 4.4 19.6 1.0
H122 A:7RR201 4.6 20.3 1.0
HB2 A:TYR58 4.6 15.3 1.0
C A:ALA52 4.7 11.8 1.0
HB1 A:ALA52 4.8 17.4 1.0
H161 A:7RR201 4.8 22.8 1.0
HA A:MET51 4.8 13.7 1.0
CG A:TYR58 4.9 13.6 1.0
CE A:MET51 4.9 18.5 1.0
C12 A:7RR201 5.0 16.9 1.0
O A:THR48 5.0 12.7 1.0

Chlorine binding site 2 out of 2 in 7ruw

Go back to Chlorine Binding Sites List in 7ruw
Chlorine binding site 2 out of 2 in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-7859


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-7859 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:33.4
occ:1.00
H A:LEU31 2.2 17.2 1.0
N A:LEU31 3.1 14.3 1.0
HA A:LEU31 3.1 14.5 1.0
O A:HOH336 3.1 47.1 1.0
HA A:ILE30 3.4 17.7 1.0
HD21 A:LEU31 3.4 23.5 1.0
CA A:LEU31 3.6 12.0 1.0
HG A:LEU31 3.8 19.4 1.0
O A:ASP29 3.9 21.2 1.0
C A:ILE30 4.1 13.2 1.0
CA A:ILE30 4.2 14.7 1.0
CD2 A:LEU31 4.2 19.5 1.0
HG23 A:ILE30 4.3 19.1 1.0
CG A:LEU31 4.4 16.1 1.0
O A:HOH350 4.5 53.0 1.0
H A:THR32 4.5 14.8 1.0
HD22 A:LEU31 4.5 23.5 1.0
CB A:LEU31 4.6 15.1 1.0
C A:LEU31 4.7 12.6 1.0
N A:THR32 4.8 12.3 1.0
C A:ASP29 4.9 19.7 1.0
HD23 A:LEU31 5.0 23.5 1.0

Reference:

A.Mamai, M.Isaac. Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-7859 To Be Published.
Page generated: Sun Jul 13 06:49:30 2025

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