Atomistry » Chlorine » PDB 7sak-7sqb » 7sdr
Atomistry »
  Chlorine »
    PDB 7sak-7sqb »
      7sdr »

Chlorine in PDB 7sdr: Papain-Like Protease of Sars Cov-2 in Complex with JUN9-72-2 Inhibitor

Enzymatic activity of Papain-Like Protease of Sars Cov-2 in Complex with JUN9-72-2 Inhibitor

All present enzymatic activity of Papain-Like Protease of Sars Cov-2 in Complex with JUN9-72-2 Inhibitor:
3.4.19.12; 3.4.22.69;

Protein crystallography data

The structure of Papain-Like Protease of Sars Cov-2 in Complex with JUN9-72-2 Inhibitor, PDB code: 7sdr was solved by J.Osipiuk, C.Tesar, M.Endres, J.Wang, A.Joachimiak, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.49 / 2.72
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 99.074, 112.605, 127.677, 90, 90, 90
R / Rfree (%) 17.3 / 21.2

Other elements in 7sdr:

The structure of Papain-Like Protease of Sars Cov-2 in Complex with JUN9-72-2 Inhibitor also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Papain-Like Protease of Sars Cov-2 in Complex with JUN9-72-2 Inhibitor (pdb code 7sdr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Papain-Like Protease of Sars Cov-2 in Complex with JUN9-72-2 Inhibitor, PDB code: 7sdr:

Chlorine binding site 1 out of 1 in 7sdr

Go back to Chlorine Binding Sites List in 7sdr
Chlorine binding site 1 out of 1 in the Papain-Like Protease of Sars Cov-2 in Complex with JUN9-72-2 Inhibitor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Papain-Like Protease of Sars Cov-2 in Complex with JUN9-72-2 Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl503

b:90.2
occ:1.00
 N B:PHE127 3.4 52.1 1.0
CG B:GLN133 3.5 67.4 1.0
CA B:GLN133 3.7 53.1 1.0
CD2 B:PHE127 4.0 48.3 1.0
CB B:PHE127 4.0 48.4 1.0
CB B:GLN133 4.0 61.0 1.0
CE1 B:TYR137 4.0 79.0 0.7
CD B:LYS126 4.1 87.4 1.0
CE B:LYS126 4.2 91.0 1.0
CA B:LYS126 4.2 59.3 1.0
CA B:PHE127 4.2 49.9 1.0
C B:LYS126 4.2 54.1 1.0
O B:GLN133 4.3 51.1 1.0
O B:PHE127 4.4 47.9 1.0
CZ B:TYR137 4.4 81.6 0.7
OH B:TYR137 4.4 84.9 0.7
CG B:PHE127 4.5 47.8 1.0
C B:GLN133 4.5 50.8 1.0
CD2 B:TYR136 4.6 75.0 1.0
N B:GLN133 4.6 48.8 1.0
O B:LEU125 4.7 55.2 1.0
CD1 B:TYR137 4.7 77.3 0.7
C B:PHE127 4.8 49.0 1.0
CD B:GLN133 4.9 74.0 1.0
CB B:TYR136 4.9 58.1 1.0

Reference:

J.Osipiuk, C.Tesar, M.Endres, J.Wang, A.Joachimiak. Papain-Like Protease of Sars Cov-2 in Complex with JUN9-72-2 Inhibitor To Be Published.
Page generated: Sun Jul 13 07:04:01 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy