Atomistry » Chlorine » PDB 7t48-7th4 » 7t8k
Atomistry »
  Chlorine »
    PDB 7t48-7th4 »
      7t8k »

Chlorine in PDB 7t8k: Brxr From Acinetobacter Brex Type I Phage Restriction System Bound to Dna

Protein crystallography data

The structure of Brxr From Acinetobacter Brex Type I Phage Restriction System Bound to Dna, PDB code: 7t8k was solved by L.Doyle, B.Kaiser, B.Stoddard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 64.22 / 2.30
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 151.586, 71.477, 87.413, 90, 105.13, 90
R / Rfree (%) 19.6 / 23.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Brxr From Acinetobacter Brex Type I Phage Restriction System Bound to Dna (pdb code 7t8k). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Brxr From Acinetobacter Brex Type I Phage Restriction System Bound to Dna, PDB code: 7t8k:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7t8k

Go back to Chlorine Binding Sites List in 7t8k
Chlorine binding site 1 out of 2 in the Brxr From Acinetobacter Brex Type I Phage Restriction System Bound to Dna


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Brxr From Acinetobacter Brex Type I Phage Restriction System Bound to Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:74.9
occ:1.00
N A:ASN105 2.8 38.7 1.0
CE A:MET101 3.4 62.0 1.0
CA A:ASN105 3.5 38.8 1.0
C A:PRO104 3.8 49.0 1.0
CA A:PRO104 4.0 40.7 1.0
N A:LEU106 4.0 35.5 1.0
C A:ASN105 4.2 44.2 1.0
CG2 B:THR155 4.3 46.8 1.0
O A:GLU103 4.5 43.2 1.0
OG1 B:THR155 4.7 53.1 1.0
CB A:ASN105 4.8 43.1 1.0
O A:LEU106 4.8 49.6 1.0
ND2 A:ASN105 4.9 46.0 1.0
CG A:ASN105 4.9 50.9 1.0
CB A:PRO104 4.9 49.7 1.0
O A:PRO104 5.0 40.5 1.0

Chlorine binding site 2 out of 2 in 7t8k

Go back to Chlorine Binding Sites List in 7t8k
Chlorine binding site 2 out of 2 in the Brxr From Acinetobacter Brex Type I Phage Restriction System Bound to Dna


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Brxr From Acinetobacter Brex Type I Phage Restriction System Bound to Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:79.3
occ:1.00
O B:ASP228 3.7 47.8 1.0
OD1 A:ASP113 3.9 59.0 1.0
CG A:ASP113 4.0 51.4 1.0
CD1 B:PHE229 4.1 45.1 1.0
O A:HOH410 4.1 46.5 1.0
O A:PRO112 4.3 47.9 1.0
CE1 B:PHE229 4.3 44.4 1.0
OD2 A:ASP113 4.4 56.6 1.0
CA A:ASP113 4.4 48.1 1.0
O A:PHE161 4.4 46.1 1.0
CB A:ASP113 4.4 53.2 1.0
CA B:PHE229 4.6 48.1 1.0
CD1 A:LEU111 4.6 54.1 1.0
CG A:LEU111 4.7 50.4 1.0
C B:ASP228 4.8 47.8 1.0
CG B:PHE229 4.8 41.7 1.0
O B:HOH616 4.8 55.1 1.0
CD2 A:LEU111 4.8 45.9 1.0
OG A:SER115 4.9 44.4 1.0

Reference:

Y.A.Luyten, D.E.Hausman, J.C.Young, L.A.Doyle, K.M.Higashi, N.C.Ubilla-Rodriguez, A.R.Lambert, C.S.Arroyo, K.J.Forsberg, R.D.Morgan, B.L.Stoddard, B.K.Kaiser. Identification and Characterization of the Wyl Brxr Protein and Its Gene As Separable Regulatory Elements of A Brex Phage Restriction System. Nucleic Acids Res. V. 50 5171 2022.
ISSN: ESSN 1362-4962
PubMed: 35511079
DOI: 10.1093/NAR/GKAC311
Page generated: Sun Jul 13 07:22:37 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy