Chlorine in PDB 7te2: Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A.

The structure of Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A., PDB code: 7te2 was solved by V.Dragnea, G.Gonzalez-Gutierrez, C.E.Bauer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.32 / 2.25
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	63.939, 63.939, 182.298, 90, 90, 120
R / Rfree (%)	23 / 25.9

The structure of Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A. also contains other interesting chemical elements:

Cobalt

(Co)

1 atom

The binding sites of Chlorine atom in the Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A. (pdb code 7te2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A., PDB code: 7te2:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl303 b:29.9 occ:1.00 NH2 A:ARG29 3.5 53.6 1.0 NE A:ARG29 3.7 45.6 1.0 CZ A:ARG29 4.1 50.4 1.0 O A:HOH472 4.1 24.4 1.0 CZ A:PHE25 4.3 23.6 1.0 CG2 A:VAL35 4.3 35.7 1.0 CD1 A:LEU81 4.8 18.6 1.0 CD A:ARG29 4.9 39.0 1.0 CG A:ARG29 5.0 32.9 1.0

Chlorine binding site 2 out of 3 in the Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl304 b:51.6 occ:1.00 N24 A:B12301 3.2 29.4 1.0 CO A:B12301 3.3 25.4 1.0 N23 A:B12301 3.7 30.3 1.0 CZ2 A:TRP54 3.8 28.9 1.0 CE2 A:TRP54 3.8 28.4 1.0 O39 A:B12301 3.8 38.0 1.0 CD2 A:PHE61 3.9 27.0 1.0 CE2 A:PHE61 3.9 26.3 1.0 N21 A:B12301 4.0 31.8 1.0 C11 A:B12301 4.0 29.2 1.0 C10 A:B12301 4.0 31.8 1.0 NE1 A:TRP54 4.1 26.2 1.0 C16 A:B12301 4.2 25.0 1.0 C19 A:B12301 4.2 25.9 1.0 N22 A:B12301 4.2 31.4 1.0 CH2 A:TRP54 4.2 25.6 1.0 C9 A:B12301 4.3 30.9 1.0 CD2 A:TRP54 4.3 30.3 1.0 C14 A:B12301 4.4 27.4 1.0 C4 A:B12301 4.4 29.8 1.0 C26 A:B12301 4.5 27.8 1.0 C6 A:B12301 4.6 31.0 1.0 C15 A:B12301 4.6 21.6 1.0 C5 A:B12301 4.6 31.6 1.0 CD1 A:TRP54 4.7 26.2 1.0 C1 A:B12301 4.7 26.3 1.0 CZ3 A:TRP54 4.7 28.1 1.0 CE3 A:TRP54 4.8 30.6 1.0 C46 A:B12301 4.9 28.3 1.0 CG A:TRP54 4.9 23.8 1.0 C54 A:B12301 4.9 23.7 1.0 C38 A:B12301 4.9 36.1 1.0

Chlorine binding site 3 out of 3 in the Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl305 b:44.0 occ:1.00 CG A:GLN79 3.2 33.7 1.0 NE2 A:GLN79 3.3 49.2 1.0 CD A:ARG117 3.3 20.1 1.0 NH1 A:ARG118 3.7 54.8 1.0 CD A:GLN79 3.8 45.3 1.0 NH1 A:ARG117 3.9 19.2 1.0 CG A:MET114 4.0 27.6 1.0 O A:THR83 4.1 43.5 1.0 CA A:THR83 4.2 38.2 1.0 CB A:ARG117 4.2 13.1 1.0 NE A:ARG117 4.3 18.1 1.0 O A:VAL82 4.3 39.3 1.0 CG A:ARG117 4.3 19.1 1.0 CG2 A:THR83 4.4 30.0 1.0 CA A:MET114 4.5 16.2 1.0 CZ A:ARG117 4.5 18.5 1.0 CB A:GLN79 4.6 22.4 1.0 O A:GLN79 4.6 15.2 1.0 C A:THR83 4.6 43.9 1.0 CB A:MET114 4.6 16.4 1.0 CB A:THR83 4.6 36.3 1.0 CZ A:ARG118 4.8 52.0 1.0 CE A:MET114 4.8 27.5 1.0 NH2 A:ARG118 4.9 47.8 1.0 SD A:MET114 5.0 31.1 1.0

V.Dragnea, G.Gonzalez-Gutierrez, C.E.Bauer. Structural Analyses of Crtj and Its B 12 -Binding Co-Regulators Saerr and Laerr From the Purple Photosynthetic Bacterium Rhodobacter Capsulatus. Microorganisms V. 10 2022.
ISSN: ESSN 2076-2607
PubMed: 35630357
DOI: 10.3390/MICROORGANISMS10050912