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Chlorine in PDB 7ti9: Crystal Structure of the Ubiquitin-Like Domain 1 (UBL1) of NSP3 From Sars-Cov-2, Form 2

Protein crystallography data

The structure of Crystal Structure of the Ubiquitin-Like Domain 1 (UBL1) of NSP3 From Sars-Cov-2, Form 2, PDB code: 7ti9 was solved by P.J.Stogios, T.Skarina, R.Di Leo, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.91 / 2.73
Space group F 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 84.27, 111.758, 145.989, 90, 90, 90
R / Rfree (%) 22.2 / 24.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Ubiquitin-Like Domain 1 (UBL1) of NSP3 From Sars-Cov-2, Form 2 (pdb code 7ti9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of the Ubiquitin-Like Domain 1 (UBL1) of NSP3 From Sars-Cov-2, Form 2, PDB code: 7ti9:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 7ti9

Go back to Chlorine Binding Sites List in 7ti9
Chlorine binding site 1 out of 3 in the Crystal Structure of the Ubiquitin-Like Domain 1 (UBL1) of NSP3 From Sars-Cov-2, Form 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Ubiquitin-Like Domain 1 (UBL1) of NSP3 From Sars-Cov-2, Form 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:88.5
occ:0.50
O A:GLU14 3.9 65.1 1.0
CG A:PRO2 4.1 104.0 1.0
CB A:PRO2 4.2 80.4 1.0
CB A:GLN16 4.3 75.7 1.0
CB A:GLU14 4.4 73.8 1.0
C A:GLU14 4.4 66.5 1.0
N A:GLN16 4.6 65.5 1.0
C A:VAL15 4.9 66.3 1.0
N A:VAL15 5.0 66.1 1.0

Chlorine binding site 2 out of 3 in 7ti9

Go back to Chlorine Binding Sites List in 7ti9
Chlorine binding site 2 out of 3 in the Crystal Structure of the Ubiquitin-Like Domain 1 (UBL1) of NSP3 From Sars-Cov-2, Form 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Ubiquitin-Like Domain 1 (UBL1) of NSP3 From Sars-Cov-2, Form 2 within 5.0Å range:

Chlorine binding site 3 out of 3 in 7ti9

Go back to Chlorine Binding Sites List in 7ti9
Chlorine binding site 3 out of 3 in the Crystal Structure of the Ubiquitin-Like Domain 1 (UBL1) of NSP3 From Sars-Cov-2, Form 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Ubiquitin-Like Domain 1 (UBL1) of NSP3 From Sars-Cov-2, Form 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:91.4
occ:1.00
CG A:GLU70 3.5 85.0 1.0
OG1 A:THR73 3.8 87.3 1.0
CB A:GLU70 4.0 67.4 1.0
CA A:GLU70 4.0 75.4 1.0
CG2 A:THR73 4.2 68.6 1.0
CD A:GLU70 4.2 91.3 1.0
CB A:THR73 4.5 67.5 1.0
O A:HOH313 4.6 72.1 1.0
OE2 A:GLU70 4.7 109.6 1.0
O A:GLU70 4.7 64.9 1.0
OE1 A:GLU70 4.9 88.5 1.0
C A:GLU70 4.9 62.0 1.0

Reference:

P.J.Stogios, P.J.Stogios, T.Skarina, R.Di Leo, A.Savchenko, A.Joachimiak, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid). N/A N/A.
Page generated: Sun Jul 13 07:28:40 2025

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