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Chlorine in PDB 7u8e: Crystal Structure of Antibody AB246 in Complex with Sars-Cov-2 Receptor Binding Domain

Protein crystallography data

The structure of Crystal Structure of Antibody AB246 in Complex with Sars-Cov-2 Receptor Binding Domain, PDB code: 7u8e was solved by R.S.Sankhala, M.G.Joyce, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.90 / 2.29
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 194.797, 41.603, 98.991, 90, 107.03, 90
R / Rfree (%) 20.4 / 24.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Antibody AB246 in Complex with Sars-Cov-2 Receptor Binding Domain (pdb code 7u8e). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Antibody AB246 in Complex with Sars-Cov-2 Receptor Binding Domain, PDB code: 7u8e:

Chlorine binding site 1 out of 1 in 7u8e

Go back to Chlorine Binding Sites List in 7u8e
Chlorine binding site 1 out of 1 in the Crystal Structure of Antibody AB246 in Complex with Sars-Cov-2 Receptor Binding Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Antibody AB246 in Complex with Sars-Cov-2 Receptor Binding Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cl301

b:58.5
occ:1.00
CA H:ASN76 3.8 21.0 1.0
C H:ASN76 3.9 26.6 1.0
N H:GLN77 4.0 15.0 1.0
NE1 H:TRP34 4.3 25.5 1.0
CE2 H:TRP34 4.3 24.6 1.0
CG2 H:VAL71 4.3 23.6 1.0
OD1 H:ASN76 4.3 32.7 1.0
O H:ASN76 4.3 22.9 1.0
CZ2 H:TRP34 4.4 22.0 1.0
O H:GLN77 4.5 18.6 1.0
CB H:ASN76 4.6 21.4 1.0
CA H:THR73 4.6 23.2 1.0
C H:GLN77 4.6 16.7 1.0
CG2 H:VAL24 4.7 20.3 1.0
CA H:GLN77 4.8 14.8 1.0
N H:ASN76 4.8 19.7 1.0
CD1 H:TRP34 4.9 20.5 1.0
CD2 H:TRP34 4.9 23.5 1.0
CG H:ASN76 4.9 33.8 1.0
O H:ASP72 5.0 20.1 1.0

Reference:

R.S.Sankhala, V.Dussupt, K.Modjarrad, M.G.Joyce. Antibody Targeting of Conserved Sites of Vulnerability on the Sars-Cov-2 Spike Receptor-Binding Domain. To Be Published.
Page generated: Sun Jul 13 07:43:56 2025

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