Chlorine in PDB 7vis: Crystal Structure of Au(200EQ)-Apo-R168H/L169C-Rhlfr

The structure of Crystal Structure of Au(200EQ)-Apo-R168H/L169C-Rhlfr, PDB code: 7vis was solved by C.Lu, X.Peng, B.Maity, N.Ito, S.Abe, T.Ueno, D.Lu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.69 / 1.85
Space group	F 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	182.594, 182.594, 182.594, 90, 90, 90
R / Rfree (%)	16.6 / 19.8

The structure of Crystal Structure of Au(200EQ)-Apo-R168H/L169C-Rhlfr also contains other interesting chemical elements:

Gold	(Au)	7 atoms
Cadmium	(Cd)	3 atoms

The binding sites of Chlorine atom in the Crystal Structure of Au(200EQ)-Apo-R168H/L169C-Rhlfr (pdb code 7vis). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Au(200EQ)-Apo-R168H/L169C-Rhlfr, PDB code: 7vis:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Au(200EQ)-Apo-R168H/L169C-Rhlfr


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Au(200EQ)-Apo-R168H/L169C-Rhlfr within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl213 b:8.2 occ:0.60 AU A:AU208 2.3 14.8 0.6 O A:HOH316 3.4 32.1 1.0 N A:ASP122 3.8 10.8 1.0 CA A:ALA121 3.9 11.2 1.0 N A:PRO123 4.0 8.6 1.0 C A:ALA121 4.0 11.9 1.0 CA A:PRO123 4.1 7.7 1.0 CD A:PRO123 4.1 9.0 1.0 C A:ASP122 4.2 8.1 1.0 CA A:SER118 4.2 13.9 1.0 SG A:CYS126 4.3 19.0 1.0 O A:GLY117 4.3 12.2 1.0 CB A:PRO123 4.3 8.7 1.0 O A:SER118 4.4 12.5 1.0 O A:ASP122 4.6 7.4 1.0 CA A:ASP122 4.6 9.1 1.0 N A:ALA121 4.7 11.5 1.0 CB A:ALA121 4.8 12.4 1.0 O A:ALA121 4.8 12.0 1.0 C A:SER118 4.8 12.7 1.0 N A:SER118 4.9 13.2 1.0 C A:GLY117 4.9 12.6 1.0 CG A:PRO123 4.9 8.8 1.0 OG A:SER118 4.9 18.9 1.0 CB A:SER118 4.9 15.3 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Au(200EQ)-Apo-R168H/L169C-Rhlfr


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Au(200EQ)-Apo-R168H/L169C-Rhlfr within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl214 b:13.1 occ:0.70 AU A:AU204 2.2 12.2 0.7 CB A:ARG52 3.5 11.7 1.0 CE2 A:PHE35 3.7 9.5 1.0 CA A:GLY34 3.7 6.5 1.0 CD2 A:PHE35 3.7 8.4 1.0 CA A:ARG52 3.8 9.3 1.0 C A:GLY34 3.9 6.8 1.0 CG A:ARG52 3.9 17.0 1.0 N A:PHE35 4.0 6.5 1.0 O A:LEU31 4.1 6.4 1.0 O A:CYS48 4.2 8.0 1.0 N A:ARG52 4.3 7.0 1.0 CD A:ARG52 4.3 25.6 1.0 SG A:CYS48 4.3 10.4 1.0 CZ A:PHE35 4.4 9.0 1.0 CG A:PHE35 4.4 7.7 1.0 CD1 A:LEU31 4.4 13.0 1.0 N A:GLY34 4.5 6.2 1.0 O A:GLY34 4.6 6.7 1.0 CA A:LEU31 4.7 7.1 1.0 O A:TYR30 4.7 5.2 1.0 CA A:PHE35 4.8 6.6 1.0 C A:LEU31 4.8 6.5 1.0 CE1 A:PHE35 5.0 8.2 1.0 CD1 A:PHE35 5.0 7.6 1.0

C.Lu, B.Maity, X.Peng, N.Ito, S.Abe, X.Sheng, T.Ueno, D.Lu. Design of A Gold Clustering Site in An Engineered Apo-Ferritin Cage Commun Chem V. 5 2022.
ISSN: ESSN 2399-3669
DOI: 10.1038/S42004-022-00651-1