Chlorine in PDB 7vjo: Pectobacterium Phage ZF40 Apo-ACA2

The structure of Pectobacterium Phage ZF40 Apo-ACA2, PDB code: 7vjo was solved by Y.H.Liu, L.S.Zhang, B.X.Wu, H.D.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.60 / 1.31
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	96.201, 34.566, 81.299, 90, 124.58, 90
R / Rfree (%)	15.6 / 18.5

The structure of Pectobacterium Phage ZF40 Apo-ACA2 also contains other interesting chemical elements:

Magnesium

(Mg)

4 atoms

The binding sites of Chlorine atom in the Pectobacterium Phage ZF40 Apo-ACA2 (pdb code 7vjo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Pectobacterium Phage ZF40 Apo-ACA2, PDB code: 7vjo:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Pectobacterium Phage ZF40 Apo-ACA2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pectobacterium Phage ZF40 Apo-ACA2 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl203 b:23.4 occ:1.00 H B:ARG77 2.4 15.6 1.0 HA B:LEU76 2.9 15.9 1.0 HG3 B:ARG77 3.1 20.8 1.0 O B:HOH496 3.2 37.5 1.0 O B:HOH346 3.2 18.3 1.0 N B:ARG77 3.2 13.0 1.0 O B:HOH484 3.3 48.1 1.0 HB2 B:ARG77 3.3 17.0 1.0 O B:HOH395 3.5 30.6 1.0 O B:HOH377 3.6 27.9 1.0 HD23 B:LEU76 3.7 20.6 1.0 HD22 B:LEU76 3.7 20.6 1.0 CA B:LEU76 3.8 13.3 1.0 CG B:ARG77 3.8 17.4 1.0 CB B:ARG77 3.9 14.2 1.0 HD2 B:ARG77 3.9 24.8 1.0 HB3 B:LEU76 3.9 15.3 1.0 C B:LEU76 4.0 12.8 1.0 CD2 B:LEU76 4.1 17.1 1.0 CA B:ARG77 4.1 13.3 1.0 O B:LYS75 4.3 16.9 1.0 CD B:ARG77 4.3 20.6 1.0 CB B:LEU76 4.4 12.8 1.0 O B:HOH508 4.5 41.3 1.0 HG2 B:ARG77 4.6 20.8 1.0 O B:HOH487 4.7 23.2 1.0 HE B:ARG77 4.7 30.4 1.0 O B:ARG77 4.8 14.5 1.0 HB3 B:ARG77 4.8 17.0 1.0 NE B:ARG77 4.8 25.4 1.0 HA B:ARG77 4.9 15.9 1.0 O B:HOH398 4.9 18.4 1.0 N B:LEU76 4.9 12.6 1.0 HD21 B:LEU76 4.9 20.6 1.0 CG B:LEU76 4.9 13.1 1.0 C B:ARG77 5.0 12.0 1.0

Chlorine binding site 2 out of 2 in the Pectobacterium Phage ZF40 Apo-ACA2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Pectobacterium Phage ZF40 Apo-ACA2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl203 b:24.0 occ:1.00 HD21 A:ASN3 2.4 21.0 1.0 HD21 B:ASN80 2.5 21.1 1.0 HD3 A:LYS4 3.2 22.8 1.0 ND2 A:ASN3 3.3 17.5 1.0 ND2 B:ASN80 3.4 17.6 1.0 O A:HOH395 3.4 34.9 1.0 O A:HOH444 3.4 52.9 1.0 HG3 A:LYS4 3.6 18.5 1.0 O A:HOH402 3.7 28.8 1.0 HD22 B:ASN80 3.7 21.1 1.0 O A:HOH330 3.8 27.0 1.0 HD22 A:ASN3 3.8 21.0 1.0 HG2 A:LYS4 3.9 18.5 1.0 CD A:LYS4 3.9 19.0 1.0 CG A:LYS4 4.0 15.4 1.0 HE2 A:LYS4 4.1 22.4 1.0 O B:HOH320 4.1 30.7 1.0 OD1 A:ASN3 4.1 18.7 1.0 CG A:ASN3 4.1 14.6 1.0 CG B:ASN80 4.3 16.6 1.0 HZ3 A:LYS4 4.3 22.6 1.0 OD1 B:ASN80 4.3 18.6 1.0 CE A:LYS4 4.5 18.7 1.0 HD2 A:LYS4 4.7 22.8 1.0 O A:SER37 4.9 19.4 1.0 NZ A:LYS4 4.9 18.8 1.0

Y.H.Liu, L.S.Zhang, B.X.Wu, H.D.Huang. Pectobacterium Phage ZF40 Apo-ACA2 To Be Published.