Chlorine in PDB 7vqm: GH2 Beta-Galacturonate Aqgala in Complex with Galacturonide

The structure of GH2 Beta-Galacturonate Aqgala in Complex with Galacturonide, PDB code: 7vqm was solved by J.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.95 / 2.40
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	83.413, 154.006, 115.925, 90, 109.78, 90
R / Rfree (%)	20 / 25.7

The binding sites of Chlorine atom in the GH2 Beta-Galacturonate Aqgala in Complex with Galacturonide (pdb code 7vqm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the GH2 Beta-Galacturonate Aqgala in Complex with Galacturonide, PDB code: 7vqm:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the GH2 Beta-Galacturonate Aqgala in Complex with Galacturonide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of GH2 Beta-Galacturonate Aqgala in Complex with Galacturonide within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl701 b:17.6 occ:1.00 N A:ARG590 3.2 11.7 1.0 NZ A:LYS591 3.3 13.0 1.0 NE2 A:GLN585 3.4 11.6 1.0 CZ3 A:TRP541 3.8 14.3 1.0 OD1 A:ASN589 4.0 10.8 1.0 CG A:LYS591 4.0 12.4 1.0 CA A:ASN589 4.0 11.2 1.0 C A:ASN589 4.1 11.5 1.0 CA A:ARG590 4.1 11.8 1.0 CH2 A:TRP541 4.1 14.3 1.0 CB A:ARG590 4.1 12.2 1.0 CG A:ASN589 4.2 10.9 1.0 CE A:LYS591 4.2 12.9 1.0 CA A:GLY528 4.2 11.7 1.0 N A:LYS591 4.3 12.0 1.0 NH1 A:ARG579 4.3 12.0 1.0 CD A:ARG579 4.4 12.6 1.0 CD A:GLN585 4.4 11.9 1.0 C A:ARG590 4.4 12.3 1.0 CG A:GLN585 4.6 11.9 1.0 ND2 A:ASN589 4.6 10.8 1.0 O A:TRP588 4.7 11.9 1.0 OE1 B:GLU94 4.7 12.4 1.0 NE A:ARG579 4.7 12.6 1.0 CD A:LYS591 4.7 12.6 1.0 CZ A:ARG579 4.7 12.4 1.0 CB A:ASN589 4.7 11.1 1.0 N A:GLY528 4.8 11.8 1.0 CG A:ARG590 4.8 12.1 1.0 CG A:ARG579 4.9 12.7 1.0

Chlorine binding site 2 out of 4 in the GH2 Beta-Galacturonate Aqgala in Complex with Galacturonide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of GH2 Beta-Galacturonate Aqgala in Complex with Galacturonide within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl701 b:17.9 occ:1.00 O A:HOH851 3.4 14.1 1.0 NZ B:LYS591 3.4 14.2 1.0 N B:ARG590 3.4 12.9 1.0 NE2 B:GLN585 3.4 16.2 1.0 CZ3 B:TRP541 3.7 12.7 1.0 CH2 B:TRP541 4.0 12.6 1.0 CG B:LYS591 4.0 14.1 1.0 OD1 B:ASN589 4.1 13.0 1.0 CA B:ASN589 4.1 12.8 1.0 C B:ASN589 4.2 12.9 1.0 CB B:ARG590 4.2 13.2 1.0 CA B:ARG590 4.2 13.2 1.0 NH1 B:ARG579 4.2 14.3 1.0 CA B:GLY528 4.3 13.7 1.0 CG B:ASN589 4.3 12.8 1.0 CD B:ARG579 4.3 14.0 1.0 CE B:LYS591 4.3 14.1 1.0 CD B:GLN585 4.5 15.5 1.0 N B:LYS591 4.5 13.4 1.0 OE1 A:GLU94 4.5 11.8 1.0 CG B:GLN585 4.5 14.7 1.0 C B:ARG590 4.6 13.6 1.0 CZ B:ARG579 4.6 13.8 1.0 NE B:ARG579 4.6 14.2 1.0 ND2 B:ASN589 4.7 12.6 1.0 O B:TRP588 4.7 13.0 1.0 CD B:LYS591 4.8 13.8 1.0 CB B:ASN589 4.8 13.1 1.0 CG B:ARG590 4.9 13.0 1.0 CE3 B:TRP541 4.9 12.9 1.0 CZ2 B:TRP499 4.9 16.7 1.0 CG B:ARG579 4.9 13.6 1.0 N B:GLY528 5.0 14.3 1.0

Chlorine binding site 3 out of 4 in the GH2 Beta-Galacturonate Aqgala in Complex with Galacturonide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of GH2 Beta-Galacturonate Aqgala in Complex with Galacturonide within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl701 b:19.0 occ:1.00 N C:ARG590 3.3 14.2 1.0 NE2 C:GLN585 3.3 16.2 1.0 O D:HOH826 3.3 17.5 1.0 NZ C:LYS591 3.4 17.9 1.0 CZ3 C:TRP541 3.6 14.3 1.0 OD1 C:ASN589 3.8 12.6 1.0 CH2 C:TRP541 3.9 14.9 1.0 CG C:LYS591 3.9 17.9 1.0 CB C:ARG590 4.1 15.4 1.0 CA C:ARG590 4.1 15.2 1.0 CA C:ASN589 4.1 12.6 1.0 CE C:LYS591 4.2 18.0 1.0 C C:ASN589 4.2 13.4 1.0 CG C:ASN589 4.3 13.0 1.0 CA C:GLY528 4.3 16.1 1.0 N C:LYS591 4.4 16.7 1.0 CD C:GLN585 4.4 15.3 1.0 CD C:ARG579 4.4 16.1 1.0 C C:ARG590 4.5 15.6 1.0 NH1 C:ARG579 4.5 16.1 1.0 CG C:GLN585 4.6 14.8 1.0 CD C:LYS591 4.7 18.4 1.0 NE C:ARG579 4.7 16.0 1.0 CZ C:ARG579 4.8 16.0 1.0 ND2 C:ASN589 4.8 13.3 1.0 O C:TRP588 4.8 12.1 1.0 CG C:ARG590 4.8 15.6 1.0 OE1 D:GLU94 4.8 16.2 1.0 CB C:ASN589 4.8 12.9 1.0 CE3 C:TRP541 4.9 14.5 1.0 OE2 D:GLU94 4.9 15.0 1.0 CG C:ARG579 4.9 15.9 1.0 CZ2 C:TRP499 5.0 14.7 1.0 N C:GLY528 5.0 15.4 1.0

Chlorine binding site 4 out of 4 in the GH2 Beta-Galacturonate Aqgala in Complex with Galacturonide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of GH2 Beta-Galacturonate Aqgala in Complex with Galacturonide within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl701 b:20.6 occ:1.00 O C:HOH1067 3.0 16.8 1.0 NZ D:LYS591 3.3 18.4 1.0 N D:ARG590 3.3 13.2 1.0 NE2 D:GLN585 3.6 15.9 1.0 CZ3 D:TRP541 3.6 14.2 1.0 CH2 D:TRP541 3.8 14.7 1.0 OD1 D:ASN589 3.8 15.1 1.0 NH1 D:ARG579 4.0 19.8 1.0 CG D:LYS591 4.0 17.0 1.0 CE D:LYS591 4.0 17.8 1.0 CB D:ARG590 4.1 13.2 1.0 CA D:ASN589 4.1 13.6 1.0 CA D:ARG590 4.1 13.5 1.0 CG D:ASN589 4.1 15.1 1.0 CA D:GLY528 4.1 15.8 1.0 C D:ASN589 4.2 13.5 1.0 N D:LYS591 4.5 15.0 1.0 C D:ARG590 4.5 14.1 1.0 ND2 D:ASN589 4.5 16.0 1.0 CD D:ARG579 4.5 17.7 1.0 CZ D:ARG579 4.5 18.4 1.0 CD D:LYS591 4.6 17.2 1.0 CD D:GLN585 4.7 15.8 1.0 OE1 C:GLU94 4.7 16.4 1.0 N D:GLY528 4.7 15.4 1.0 NE D:ARG579 4.7 17.7 1.0 CB D:ASN589 4.8 14.2 1.0 O D:TRP588 4.8 12.8 1.0 CG D:GLN585 4.8 15.0 1.0 CE3 D:TRP541 4.8 14.4 1.0 CZ2 D:TRP499 4.9 18.6 1.0 CG D:ARG590 4.9 13.1 1.0 CG D:ARG579 5.0 17.4 1.0

J.Yang, J.Yang. N/A N/A.