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Chlorine in PDB 7wbf: Crystal Structure of Lysozyme

Enzymatic activity of Crystal Structure of Lysozyme

All present enzymatic activity of Crystal Structure of Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of Crystal Structure of Lysozyme, PDB code: 7wbf was solved by K.H.Nam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.57 / 1.60
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.135, 79.135, 37.018, 90, 90, 90
R / Rfree (%) 17.2 / 21

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Lysozyme (pdb code 7wbf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Lysozyme, PDB code: 7wbf:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 7wbf

Go back to Chlorine Binding Sites List in 7wbf
Chlorine binding site 1 out of 2 in the Crystal Structure of Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:12.7
occ:1.00
HD22 A:ASN131 2.5 15.5 1.0
HA A:ALA128 2.9 14.5 1.0
HB2 A:ASN131 2.9 11.4 1.0
HG12 A:VAL127 3.2 27.9 1.0
ND2 A:ASN131 3.3 12.9 1.0
HD2 A:ARG132 3.6 15.9 1.0
CB A:ASN131 3.7 9.5 1.0
HB2 A:ALA128 3.7 17.8 1.0
HB3 A:ASN131 3.8 11.4 1.0
CA A:ALA128 3.8 12.0 1.0
HG3 A:ARG132 3.9 17.0 1.0
HD21 A:ASN131 3.9 15.5 1.0
CG A:ASN131 4.0 11.1 1.0
CG1 A:VAL127 4.1 23.2 1.0
CB A:ALA128 4.2 14.8 1.0
N A:ALA128 4.3 11.0 1.0
O A:VAL127 4.3 11.7 1.0
CD A:ARG132 4.4 13.2 1.0
HG11 A:VAL127 4.4 27.9 1.0
HG13 A:VAL127 4.4 27.9 1.0
C A:VAL127 4.4 9.9 1.0
HB1 A:ALA128 4.5 17.8 1.0
HD3 A:ARG132 4.5 15.9 1.0
CG A:ARG132 4.6 14.1 1.0
H A:ALA128 4.7 13.2 1.0
HH11 A:ARG132 4.8 13.9 1.0
H A:ASN131 4.8 11.9 1.0
HG2 A:ARG132 4.9 17.0 1.0
O A:HOH404 4.9 26.9 1.0
C A:ALA128 4.9 11.2 1.0
O A:ALA128 5.0 11.6 1.0

Chlorine binding site 2 out of 2 in 7wbf

Go back to Chlorine Binding Sites List in 7wbf
Chlorine binding site 2 out of 2 in the Crystal Structure of Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:17.4
occ:1.00
H A:GLY44 2.4 13.5 1.0
HG A:SER42 2.5 18.4 1.0
HA A:GLN139 2.8 19.7 1.0
HB2 A:SER42 2.8 18.7 1.0
HA3 A:GLY44 2.9 12.6 1.0
HD11 A:ILE142 3.0 29.5 1.0
O A:HOH384 3.0 30.1 1.0
OG A:SER42 3.1 15.3 1.0
N A:GLY44 3.1 11.2 1.0
CB A:SER42 3.4 15.6 1.0
CA A:GLY44 3.5 10.5 1.0
HG12 A:ILE142 3.6 22.7 1.0
HB2 A:GLN139 3.6 23.6 1.0
CA A:GLN139 3.6 16.4 1.0
HG23 A:VAL138 3.8 20.3 1.0
CD1 A:ILE142 3.9 24.5 1.0
HG2 A:GLN139 4.0 29.5 1.0
N A:GLN139 4.0 15.9 1.0
HB3 A:SER42 4.0 18.7 1.0
H A:LEU43 4.0 15.0 1.0
CB A:GLN139 4.0 19.6 1.0
HG21 A:VAL138 4.1 20.3 1.0
N A:LEU43 4.1 12.4 1.0
HA2 A:GLY44 4.1 12.6 1.0
H A:ASN45 4.2 11.6 1.0
CG1 A:ILE142 4.2 18.9 1.0
HD12 A:ILE142 4.2 29.5 1.0
HB3 A:LEU43 4.3 15.1 1.0
C A:SER42 4.3 11.2 1.0
H A:GLN139 4.3 19.2 1.0
C A:LEU43 4.3 11.8 1.0
O A:VAL138 4.4 13.6 1.0
C A:VAL138 4.4 14.7 1.0
CG2 A:VAL138 4.4 16.9 1.0
CG A:GLN139 4.5 24.5 1.0
HD13 A:ILE142 4.5 29.5 1.0
CA A:SER42 4.5 11.4 1.0
C A:GLY44 4.5 7.9 1.0
N A:ASN45 4.6 9.6 1.0
CA A:LEU43 4.7 9.9 1.0
HG23 A:ILE142 4.7 18.6 1.0
O A:SER42 4.7 12.4 1.0
HG13 A:ILE142 4.7 22.7 1.0
HB A:VAL138 4.8 17.6 1.0
HG3 A:GLN139 4.8 29.5 1.0
C A:GLN139 4.8 16.3 1.0
HB3 A:GLN139 4.9 23.6 1.0
CB A:LEU43 5.0 12.6 1.0
HD21 A:ASN45 5.0 13.7 1.0

Reference:

K.H.Nam, K.H.Nam. N/A N/A.
Page generated: Sun Jul 13 08:16:18 2025

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