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Chlorine in PDB 7yi6: Bnab 3D1 in Complex with 6-Mer HR1 Peptide From Hcov-229E S Protein

Protein crystallography data

The structure of Bnab 3D1 in Complex with 6-Mer HR1 Peptide From Hcov-229E S Protein, PDB code: 7yi6 was solved by L.Yan, G.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.86 / 2.28
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 73.906, 72.703, 86.264, 90, 109.54, 90
R / Rfree (%) 19.3 / 22

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Bnab 3D1 in Complex with 6-Mer HR1 Peptide From Hcov-229E S Protein (pdb code 7yi6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Bnab 3D1 in Complex with 6-Mer HR1 Peptide From Hcov-229E S Protein, PDB code: 7yi6:

Chlorine binding site 1 out of 1 in 7yi6

Go back to Chlorine Binding Sites List in 7yi6
Chlorine binding site 1 out of 1 in the Bnab 3D1 in Complex with 6-Mer HR1 Peptide From Hcov-229E S Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Bnab 3D1 in Complex with 6-Mer HR1 Peptide From Hcov-229E S Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl303

b:30.0
occ:1.00
NH2 B:ARG63 3.4 33.8 1.0
OE1 B:GLU83 3.4 48.1 1.0
O B:HOH486 3.5 39.4 1.0
CG B:PRO61 3.6 27.0 1.0
NE B:ARG63 4.0 34.2 1.0
OE1 B:GLN81 4.1 55.3 1.0
NE2 B:GLN81 4.1 51.2 1.0
CZ B:ARG63 4.2 35.8 1.0
CD B:PRO61 4.4 33.5 1.0
CD B:GLN81 4.5 52.3 1.0
CB B:PRO61 4.6 29.8 1.0
CD B:GLU83 4.7 50.2 1.0

Reference:

L.Yan, G.Yang. Cross-Reactive Epitopes Between Hiv and Coronavirus Revealed By 3D1 To Be Published.
Page generated: Sun Jul 13 08:35:47 2025

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