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Chlorine in PDB 7z87: Dna-Pk in the Active State

Enzymatic activity of Dna-Pk in the Active State

All present enzymatic activity of Dna-Pk in the Active State:
2.7.11.1;

Other elements in 7z87:

The structure of Dna-Pk in the Active State also contains other interesting chemical elements:

Fluorine (F) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Dna-Pk in the Active State (pdb code 7z87). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Dna-Pk in the Active State, PDB code: 7z87:

Chlorine binding site 1 out of 1 in 7z87

Go back to Chlorine Binding Sites List in 7z87
Chlorine binding site 1 out of 1 in the Dna-Pk in the Active State


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Dna-Pk in the Active State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl4201

b:100.7
occ:1.00
CL1 A:1IX4201 0.0 100.7 1.0
C11 A:1IX4201 1.8 100.7 1.0
OG A:SER3731 2.6 134.6 1.0
C10 A:1IX4201 2.8 100.7 1.0
C12 A:1IX4201 2.8 100.7 1.0
C09 A:1IX4201 3.1 100.7 1.0
O A:ALA3730 3.5 131.5 1.0
C A:ALA3730 3.8 131.5 1.0
N05 A:1IX4201 3.9 100.7 1.0
C06 A:1IX4201 3.9 100.7 1.0
CB A:SER3731 4.0 134.6 1.0
C15 A:1IX4201 4.1 100.7 1.0
N A:ALA3730 4.2 131.5 1.0
C13 A:1IX4201 4.2 100.7 1.0
CE A:MET3729 4.2 123.8 1.0
N A:SER3731 4.2 134.6 1.0
O34 A:1IX4201 4.3 100.7 1.0
CB A:MET3729 4.3 123.8 1.0
CA A:SER3731 4.5 134.6 1.0
C A:MET3729 4.5 123.8 1.0
CA A:ALA3730 4.5 131.5 1.0
C14 A:1IX4201 4.7 100.7 1.0
O A:MET3729 5.0 123.8 1.0
CA A:MET3729 5.0 123.8 1.0

Reference:

S.Liang, T.L.Blundell. Human Dna-Dependent Protein Kinase Activation Mechanism. Nat.Struct.Mol.Biol. 2023.
ISSN: ESSN 1545-9985
PubMed: 36604499
DOI: 10.1038/S41594-022-00881-W
Page generated: Sun Jul 13 08:43:45 2025

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