Chlorine in PDB 7zcy: Sporosarcina Pasteurii Urease (Spu) Co-Crystallized in the Presence of An Ebselen-Derivative and Bound to Se Atoms

Enzymatic activity of Sporosarcina Pasteurii Urease (Spu) Co-Crystallized in the Presence of An Ebselen-Derivative and Bound to Se Atoms

All present enzymatic activity of Sporosarcina Pasteurii Urease (Spu) Co-Crystallized in the Presence of An Ebselen-Derivative and Bound to Se Atoms:
3.5.1.5;

Protein crystallography data

The structure of Sporosarcina Pasteurii Urease (Spu) Co-Crystallized in the Presence of An Ebselen-Derivative and Bound to Se Atoms, PDB code: 7zcy was solved by L.Mazzei, S.Ciurli, M.Cianci, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	97.80 / 1.54
*Space group*	P 6₃ 2 2
*Cell size a, b, c (Å), α, β, γ (°)*	131.612, 131.612, 189.003, 90, 90, 120
*R / R_free (%)*	13.7 / 16

Other elements in 7zcy:

The structure of Sporosarcina Pasteurii Urease (Spu) Co-Crystallized in the Presence of An Ebselen-Derivative and Bound to Se Atoms also contains other interesting chemical elements:

Fluorine	(F)	1 atom
Nickel	(Ni)	2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Sporosarcina Pasteurii Urease (Spu) Co-Crystallized in the Presence of An Ebselen-Derivative and Bound to Se Atoms (pdb code 7zcy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Sporosarcina Pasteurii Urease (Spu) Co-Crystallized in the Presence of An Ebselen-Derivative and Bound to Se Atoms, PDB code: 7zcy:

Chlorine binding site 1 out of 1 in 7zcy

Go back to

Chlorine Binding Sites List in 7zcy

Chlorine binding site 1 out of 1 in the Sporosarcina Pasteurii Urease (Spu) Co-Crystallized in the Presence of An Ebselen-Derivative and Bound to Se Atoms

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Sporosarcina Pasteurii Urease (Spu) Co-Crystallized in the Presence of An Ebselen-Derivative and Bound to Se Atoms within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
C:Cl605 b:80.4 occ:1.00	CL	C:IU9605	0.0	80.4	1.0
	C12	C:IU9605	1.7	69.6	1.0
	C11	C:IU9605	2.7	69.4	1.0
	C7	C:IU9605	2.7	61.3	1.0
	N	C:IU9605	2.9	43.6	1.0
	CA	C:ARG388	3.6	27.9	0.7
	CA	C:ARG388	3.7	29.9	0.3
	O	C:GLN387	3.7	30.1	1.0
	O	C:ARG388	3.9	32.5	0.3
	O	C:ARG388	3.9	34.6	0.7
	C6	C:IU9605	3.9	51.1	1.0
	C10	C:IU9605	3.9	67.7	1.0
	C8	C:IU9605	4.0	62.9	1.0
	C	C:ARG388	4.2	28.9	0.7
	C	C:ARG388	4.2	30.2	0.3
	CB	C:ARG388	4.2	29.2	0.7
	CB	C:ARG388	4.3	30.9	0.3
	CG	C:ARG388	4.3	30.9	0.7
	C9	C:IU9605	4.5	69.4	1.0
	C	C:GLN387	4.5	30.6	1.0
	N	C:ARG388	4.6	27.7	0.7
	N	C:ARG388	4.6	29.5	0.3
	O	C:IU9605	4.6	39.5	1.0
	C5	C:IU9605	4.7	38.7	1.0
	CG	C:ARG388	4.7	31.8	0.3
	C4	C:IU9605	4.8	39.3	1.0

Reference:

L.Mazzei, S.Ciurli, M.Cianci. Sporosarcina Pasteurii Urease (Spu) Co-Crystallized in the Presence of An Ebselen-Derivative and Bound to Se Atoms To Be Published.

Page generated: Sun Jul 13 08:45:14 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO

	© Copyright 2008-2020 by atomistry.com
Home \| Site Map \| Copyright \| Contact us \| Privacy