Chlorine in PDB 8b2r: Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pikf with A Rice (Oryza Sativa) RGA5 Hma Domain Mutant.

The structure of Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pikf with A Rice (Oryza Sativa) RGA5 Hma Domain Mutant., PDB code: 8b2r was solved by A.R.Bentham, M.J.Banfield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.24 / 1.22
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	31.906, 57.896, 76.657, 90, 90, 90
R / Rfree (%)	15 / 20.4

The binding sites of Chlorine atom in the Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pikf with A Rice (Oryza Sativa) RGA5 Hma Domain Mutant. (pdb code 8b2r). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pikf with A Rice (Oryza Sativa) RGA5 Hma Domain Mutant., PDB code: 8b2r:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pikf with A Rice (Oryza Sativa) RGA5 Hma Domain Mutant.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pikf with A Rice (Oryza Sativa) RGA5 Hma Domain Mutant. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1102 b:21.5 occ:1.00 H A:LEU1063 2.2 11.8 1.0 HH21 A:ARG1055 2.9 18.0 0.5 HA A:GLU1062 3.0 13.3 1.0 O A:HOH1219 3.0 14.5 1.0 HB2 A:LEU1063 3.0 15.4 1.0 N A:LEU1063 3.1 11.5 1.0 HG13 A:VAL1051 3.2 22.2 1.0 HB3 A:LEU1063 3.4 15.4 1.0 NH2 A:ARG1055 3.5 18.1 0.5 HH22 A:ARG1055 3.6 18.2 0.5 CB A:LEU1063 3.6 15.8 1.0 CA A:GLU1062 3.8 13.2 1.0 C A:GLU1062 3.9 12.4 1.0 HG3 A:GLU1062 4.0 17.2 1.0 CA A:LEU1063 4.0 11.4 1.0 CG1 A:VAL1051 4.1 24.1 1.0 HG21 A:VAL1051 4.2 18.4 1.0 HG12 A:VAL1051 4.2 24.0 1.0 HZ2 B:LYS79 4.3 17.2 1.0 O A:ALA1061 4.4 14.6 1.0 HG2 A:GLU1062 4.5 16.6 1.0 CG A:GLU1062 4.6 17.3 1.0 HD22 A:LEU1063 4.6 18.0 1.0 HH12 A:ARG1055 4.6 30.0 0.0 O A:LEU1063 4.6 12.8 1.0 CZ A:ARG1055 4.6 19.8 0.5 HG11 A:VAL1051 4.7 21.7 1.0 HD21 A:LEU1063 4.7 17.6 1.0 CB A:GLU1062 4.7 15.0 1.0 HA A:LEU1063 4.8 11.4 1.0 HB A:VAL1051 4.8 18.5 1.0 CG2 A:VAL1051 4.8 18.7 1.0 N A:GLU1062 4.8 13.8 1.0 HG23 A:VAL1051 4.8 17.9 1.0 CB A:VAL1051 4.8 18.1 1.0 C A:LEU1063 4.9 11.7 1.0 CG A:LEU1063 4.9 17.7 1.0 CD2 A:LEU1063 4.9 17.3 1.0 NH1 A:ARG1055 5.0 26.4 0.5

Chlorine binding site 2 out of 2 in the Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pikf with A Rice (Oryza Sativa) RGA5 Hma Domain Mutant.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Complex of Rice Blast (Magnaporthe Oryzae) Effector Protein Avr-Pikf with A Rice (Oryza Sativa) RGA5 Hma Domain Mutant. within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl201 b:23.0 occ:1.00 HA B:VAL51 2.7 12.2 1.0 O B:HOH390 2.8 15.6 1.0 HG13 B:ILE49 2.8 14.1 1.0 O B:ASN46 2.8 14.0 1.0 HB3 B:ASP45 3.1 13.6 1.0 O B:PRO50 3.1 12.1 1.0 O B:ILE49 3.1 12.9 1.0 HD3 B:PRO52 3.2 11.7 1.0 H B:ASN46 3.2 13.5 1.0 HD2 B:PRO52 3.3 11.8 1.0 N B:ASN46 3.4 14.3 1.0 HA B:ASP45 3.4 13.1 1.0 HG23 B:VAL51 3.4 14.8 1.0 HG12 B:ILE49 3.5 15.0 1.0 CG1 B:ILE49 3.6 14.6 1.0 C B:PRO50 3.6 12.4 1.0 CA B:VAL51 3.6 12.1 1.0 C B:ASP45 3.6 14.4 1.0 HB3 B:ASN46 3.7 16.9 1.0 CD B:PRO52 3.7 11.3 1.0 C B:ASN46 3.7 15.3 1.0 CA B:ASP45 3.8 13.6 1.0 N B:VAL51 3.8 12.2 1.0 CB B:ASP45 3.8 13.8 1.0 HD13 B:ILE49 3.9 14.1 1.0 C B:ILE49 4.0 13.1 1.0 CA B:ASN46 4.0 15.3 1.0 H B:ILE49 4.2 13.1 1.0 HG11 B:VAL51 4.2 13.6 1.0 CG2 B:VAL51 4.3 14.9 1.0 CD1 B:ILE49 4.3 14.2 1.0 CB B:ASN46 4.3 17.2 1.0 HH B:TYR71 4.3 30.0 0.0 O B:ASP45 4.3 18.0 1.0 CB B:VAL51 4.4 12.9 1.0 OD1 B:ASP45 4.4 14.2 1.0 H B:VAL51 4.5 12.9 1.0 CG B:ASP45 4.5 14.8 1.0 N B:PRO52 4.6 11.4 1.0 HB2 B:ASP45 4.6 14.9 1.0 C B:VAL51 4.6 12.6 1.0 O A:HOH1248 4.6 16.9 1.0 HG22 B:VAL51 4.6 15.1 1.0 N B:PRO50 4.7 13.2 1.0 CA B:PRO50 4.7 12.3 1.0 CB B:ILE49 4.7 13.2 1.0 CA B:ILE49 4.7 12.9 1.0 O B:HOH323 4.8 15.1 1.0 CG1 B:VAL51 4.9 13.8 1.0 HB2 B:ASN46 4.9 16.1 1.0 N B:ILE49 4.9 12.7 1.0 OH B:TYR71 4.9 12.4 1.0 O B:HOH387 4.9 27.9 1.0 HA B:ASN46 4.9 15.4 1.0 HG3 B:PRO52 4.9 12.1 1.0 CG B:PRO52 4.9 13.1 1.0 HD11 B:ILE49 4.9 14.4 1.0 HD12 B:ILE49 4.9 13.8 1.0 HA B:PRO50 5.0 12.9 1.0 N B:ALA47 5.0 17.4 1.0 HG21 B:VAL51 5.0 15.0 1.0

A.R.Bentham, J.C.De La Concepcion, S.Jones, J.Vega Benjumea, M.Mendel, J.Stubbs, C.Stevenson, J.H.R.Maidment, J.Kourelis, R.Zdrzalek, S.Kamoun, M.J.Banfield. Exploiting Allelic Compatibility in Plant Immune Receptors Facilitates Engineering of New Effector Recognition Specificities. To Be Published.