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Chlorine in PDB 8byg: Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (1047648)

Protein crystallography data

The structure of Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (1047648), PDB code: 8byg was solved by E.J.Visser, E.Sijbesma, C.Ottmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.12 / 1.70
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 82.167, 112.522, 62.623, 90, 90, 90
R / Rfree (%) 17.8 / 22

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (1047648) (pdb code 8byg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (1047648), PDB code: 8byg:

Chlorine binding site 1 out of 1 in 8byg

Go back to Chlorine Binding Sites List in 8byg
Chlorine binding site 1 out of 1 in the Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (1047648)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Fragment-Linked Stabilizer For Era - 14-3-3 Interaction (1047648) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:44.9
occ:0.78
CL A:S6O401 0.0 44.9 0.8
C14 A:S6O401 1.7 31.9 0.8
O A:HOH590 2.7 32.2 1.0
C15 A:S6O401 2.7 28.5 0.8
C13 A:S6O401 2.7 15.6 0.8
H16 A:S6O401 2.8 34.1 0.8
H15 A:S6O401 2.8 18.8 0.8
HZ1 A:LYS122 2.9 14.7 1.0
HE3 A:LYS122 3.1 14.3 1.0
O B:HOH601 3.4 20.4 1.0
NZ A:LYS122 3.5 12.3 1.0
HD3 A:LYS122 3.6 12.4 1.0
HZ3 A:LYS122 3.6 14.7 1.0
HG23 B:VAL595 3.6 18.5 1.0
HE2 A:PHE119 3.6 19.5 1.0
CE A:LYS122 3.7 11.9 1.0
O A:HOH637 3.7 21.5 1.0
OXT B:VAL595 3.9 19.4 1.0
C16 A:S6O401 4.0 31.6 0.8
C12 A:S6O401 4.0 22.8 0.8
O A:HOH696 4.0 24.9 1.0
CE2 A:PHE119 4.0 16.2 1.0
CD A:LYS122 4.1 10.3 1.0
HZ2 A:LYS122 4.3 14.7 1.0
O B:VAL595 4.4 15.5 1.0
C B:VAL595 4.4 21.8 1.0
C11 A:S6O401 4.5 27.2 0.8
HD2 A:PHE119 4.5 16.0 1.0
CG2 B:VAL595 4.5 15.4 1.0
CD2 A:PHE119 4.6 13.3 1.0
HD2 A:LYS122 4.6 12.4 1.0
HE2 A:LYS122 4.6 14.3 1.0
HB B:VAL595 4.6 21.4 1.0
CZ A:PHE119 4.6 14.0 1.0
HZ A:PHE119 4.7 16.8 1.0
OG A:SER45 4.7 15.6 0.5
O A:HOH521 4.7 16.3 1.0
HG A:SER45 4.8 18.7 0.5
H17 A:S6O401 4.8 37.9 0.8
O A:HOH560 4.8 27.5 1.0
H14 A:S6O401 4.8 27.3 0.8
HG21 B:VAL595 4.8 18.5 1.0
HG23 A:ILE168 4.9 19.4 1.0
HA3 A:GLY171 4.9 12.6 1.0
HA A:ILE168 4.9 14.5 1.0

Reference:

E.J.Visser, P.Jaishankar, E.Sijbesma, M.A.M.Pennings, E.M.F.Vandenboorn, X.Guillory, R.J.Neitz, J.Morrow, S.Dutta, A.R.Renslo, L.Brunsveld, M.R.Arkin, C.Ottmann. From Tethered to Freestanding Stabilizers of 14-3-3 Protein-Protein Interactions Through Fragment Linking. Angew.Chem.Int.Ed.Engl. 08004 2023.
ISSN: ESSN 1521-3773
PubMed: 37455289
DOI: 10.1002/ANIE.202308004
Page generated: Sun Jul 13 09:51:20 2025

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