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Chlorine in PDB 8ebk: Crystal Structure Analysis of Xhdmx in Complex with the Stapled Peptide Protac Analog

Protein crystallography data

The structure of Crystal Structure Analysis of Xhdmx in Complex with the Stapled Peptide Protac Analog, PDB code: 8ebk was solved by H.-S.Seo, S.Dhe-Paganon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.03 / 1.29
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 81.52, 108.4, 30.73, 90, 90, 90
R / Rfree (%) 16.4 / 18.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure Analysis of Xhdmx in Complex with the Stapled Peptide Protac Analog (pdb code 8ebk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure Analysis of Xhdmx in Complex with the Stapled Peptide Protac Analog, PDB code: 8ebk:

Chlorine binding site 1 out of 1 in 8ebk

Go back to Chlorine Binding Sites List in 8ebk
Chlorine binding site 1 out of 1 in the Crystal Structure Analysis of Xhdmx in Complex with the Stapled Peptide Protac Analog


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure Analysis of Xhdmx in Complex with the Stapled Peptide Protac Analog within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1

b:47.6
occ:1.00
CL1 B:WG01 0.0 47.6 1.0
C15 B:WG01 1.7 46.0 1.0
C13 B:WG01 2.7 44.6 1.0
C16 B:WG01 2.7 45.1 1.0
C14 B:WG01 4.0 44.1 1.0
C17 B:WG01 4.0 44.7 1.0
C12 B:WG01 4.5 44.2 1.0

Reference:

H.-S.Seo, S.Dhe-Paganon. Crystal Structure Analysis of Xhdmx in Complex with the Stapled Peptide Protac Analog To Be Published.
Page generated: Sun Jul 13 10:59:34 2025

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