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Chlorine in PDB 8hyf: Crystal Structure of Banana Lectin in-Complex with Fucose at 2.95 A Resolution

Protein crystallography data

The structure of Crystal Structure of Banana Lectin in-Complex with Fucose at 2.95 A Resolution, PDB code: 8hyf was solved by S.Rasheed, R.Arif, N.Huda, M.S.Ahmad, S.M.Mateen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 16.96 / 2.95
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 81.219, 81.219, 147.315, 90, 90, 120
R / Rfree (%) 18.4 / 24.2

Other elements in 8hyf:

The structure of Crystal Structure of Banana Lectin in-Complex with Fucose at 2.95 A Resolution also contains other interesting chemical elements:

Cadmium (Cd) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Banana Lectin in-Complex with Fucose at 2.95 A Resolution (pdb code 8hyf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Banana Lectin in-Complex with Fucose at 2.95 A Resolution, PDB code: 8hyf:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 8hyf

Go back to Chlorine Binding Sites List in 8hyf
Chlorine binding site 1 out of 3 in the Crystal Structure of Banana Lectin in-Complex with Fucose at 2.95 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Banana Lectin in-Complex with Fucose at 2.95 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl206

b:31.3
occ:1.00
N B:ASP19 3.5 20.0 1.0
CA B:PHE18 3.8 22.6 1.0
C B:PHE18 4.1 20.8 1.0
O B:ASP19 4.1 20.4 1.0
CB B:PHE18 4.3 21.9 1.0
CA B:ASP19 4.3 20.2 1.0
C B:ASP19 4.5 19.8 1.0
CB B:ASP19 4.5 20.5 1.0
O B:ALA17 4.6 24.2 1.0
O B:HOH332 4.6 16.0 1.0
N B:PHE18 4.9 24.3 1.0

Chlorine binding site 2 out of 3 in 8hyf

Go back to Chlorine Binding Sites List in 8hyf
Chlorine binding site 2 out of 3 in the Crystal Structure of Banana Lectin in-Complex with Fucose at 2.95 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Banana Lectin in-Complex with Fucose at 2.95 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl207

b:43.2
occ:1.00
N B:HIS54 3.6 34.0 1.0
CA B:ARG53 3.8 35.6 1.0
C B:ARG53 4.2 35.3 1.0
O B:THR52 4.2 31.3 1.0
CD B:ARG53 4.3 47.5 1.0
O B:HIS54 4.3 32.0 1.0
CB B:ARG53 4.4 40.2 1.0
CB B:HIS54 4.5 35.5 1.0
CA B:HIS54 4.5 33.0 1.0
N B:ARG53 4.8 32.0 1.0
C B:THR52 4.9 30.2 1.0
CG B:ARG53 4.9 43.2 1.0
NE B:ARG53 5.0 53.9 1.0
C B:HIS54 5.0 31.6 1.0
O B:HOH332 5.0 16.0 1.0

Chlorine binding site 3 out of 3 in 8hyf

Go back to Chlorine Binding Sites List in 8hyf
Chlorine binding site 3 out of 3 in the Crystal Structure of Banana Lectin in-Complex with Fucose at 2.95 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Banana Lectin in-Complex with Fucose at 2.95 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl208

b:42.8
occ:1.00
OE1 B:GLU140 4.2 24.9 1.0
OH B:TYR47 4.6 28.1 1.0
OE2 B:GLU140 4.8 27.6 1.0
CD B:GLU140 4.8 24.0 1.0

Reference:

S.Rasheed, R.Arif, N.Huda, M.S.Ahmad, S.M.Mateen. Crystal Structure of Banana Lectin in-Complex with L-Fucose at 2.95 A Resolution To Be Published.
Page generated: Sun Jul 13 12:09:51 2025

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