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Chlorine in PDB 8it5: Phosphoglycerate Mutase 1 Complexed with A Compound

Enzymatic activity of Phosphoglycerate Mutase 1 Complexed with A Compound

All present enzymatic activity of Phosphoglycerate Mutase 1 Complexed with A Compound:
5.4.2.11; 5.4.2.4;

Protein crystallography data

The structure of Phosphoglycerate Mutase 1 Complexed with A Compound, PDB code: 8it5 was solved by L.Zhou, L.L.Jiang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.89 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 82.377, 85.362, 102.577, 90, 90, 90
R / Rfree (%) 18.9 / 22.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Phosphoglycerate Mutase 1 Complexed with A Compound (pdb code 8it5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Phosphoglycerate Mutase 1 Complexed with A Compound, PDB code: 8it5:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8it5

Go back to Chlorine Binding Sites List in 8it5
Chlorine binding site 1 out of 2 in the Phosphoglycerate Mutase 1 Complexed with A Compound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Phosphoglycerate Mutase 1 Complexed with A Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:41.8
occ:1.00
NH1 C:ARG83 3.2 37.2 1.0
NH2 B:ARG83 3.2 37.3 1.0
NH2 C:ARG83 3.3 37.9 1.0
NH1 B:ARG83 3.3 36.4 1.0
NE1 B:TRP68 3.4 41.2 1.0
NE1 C:TRP68 3.4 39.0 1.0
CZ C:ARG83 3.7 40.5 1.0
CZ B:ARG83 3.7 39.9 1.0
CG2 B:VAL81 4.0 40.1 1.0
CB B:VAL81 4.1 37.2 1.0
CG2 C:VAL81 4.1 36.6 1.0
CB C:VAL81 4.1 39.4 1.0
CE2 C:TRP68 4.2 37.4 1.0
CE2 B:TRP68 4.3 36.4 1.0
CD1 B:TRP68 4.3 33.2 1.0
CD1 C:TRP68 4.3 36.4 1.0
CG1 B:VAL81 4.3 40.4 1.0
CG1 C:VAL81 4.3 33.5 1.0
CZ2 C:TRP68 4.5 37.3 1.0
CZ2 B:TRP68 4.5 37.8 1.0

Chlorine binding site 2 out of 2 in 8it5

Go back to Chlorine Binding Sites List in 8it5
Chlorine binding site 2 out of 2 in the Phosphoglycerate Mutase 1 Complexed with A Compound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Phosphoglycerate Mutase 1 Complexed with A Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:62.6
occ:1.00
CL01 C:QAI302 0.0 62.6 1.0
C02 C:QAI302 1.8 54.6 1.0
C03 C:QAI302 2.7 56.5 1.0
C31 C:QAI302 2.7 55.3 1.0
NH2 C:ARG90 3.2 45.0 1.0
CZ C:ARG90 3.7 50.6 1.0
CD1 C:TYR92 3.9 46.6 1.0
CB C:PRO123 3.9 52.7 1.0
CD C:PRO123 3.9 47.5 1.0
CG C:PRO123 3.9 50.7 1.0
NH1 C:ARG90 3.9 46.2 1.0
C04 C:QAI302 4.0 52.9 1.0
CB C:TRP115 4.0 51.2 1.0
C30 C:QAI302 4.0 55.9 1.0
CE1 C:TYR92 4.1 46.4 1.0
CD1 C:LEU95 4.2 43.5 1.0
C05 C:QAI302 4.5 57.6 1.0
CG C:TRP115 4.5 51.1 1.0
O C:TRP115 4.5 55.9 1.0
NE C:ARG90 4.5 49.1 1.0
N C:PRO123 4.6 51.2 1.0
CA C:PRO123 4.7 47.7 1.0
C C:TRP115 4.8 52.3 1.0
CA C:TRP115 4.9 54.1 1.0

Reference:

L.Zhou, L.L.Jiang. Phosphoglycerate Mutase 1 Complexed with A Compound To Be Published.
Page generated: Sun Jul 13 12:28:51 2025

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