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Chlorine in PDB 8itd: Phosphoglycerate Mutase 1 Complexed with A Compound

Enzymatic activity of Phosphoglycerate Mutase 1 Complexed with A Compound

All present enzymatic activity of Phosphoglycerate Mutase 1 Complexed with A Compound:
5.4.2.11; 5.4.2.4;

Protein crystallography data

The structure of Phosphoglycerate Mutase 1 Complexed with A Compound, PDB code: 8itd was solved by L.Zhou, L.L.Jiang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.21 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 82.544, 85.99, 101.383, 90, 90, 90
R / Rfree (%) 17.4 / 19.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Phosphoglycerate Mutase 1 Complexed with A Compound (pdb code 8itd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Phosphoglycerate Mutase 1 Complexed with A Compound, PDB code: 8itd:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8itd

Go back to Chlorine Binding Sites List in 8itd
Chlorine binding site 1 out of 2 in the Phosphoglycerate Mutase 1 Complexed with A Compound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Phosphoglycerate Mutase 1 Complexed with A Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:23.7
occ:1.00
NH2 B:ARG83 3.3 20.4 1.0
NH1 C:ARG83 3.3 20.9 1.0
NH1 B:ARG83 3.3 21.9 1.0
NH2 C:ARG83 3.3 20.9 1.0
NE1 C:TRP68 3.4 23.1 1.0
NE1 B:TRP68 3.4 20.3 1.0
CZ B:ARG83 3.7 23.8 1.0
CZ C:ARG83 3.8 23.9 1.0
CG2 C:VAL81 4.0 21.0 1.0
CB C:VAL81 4.0 23.2 1.0
CG2 B:VAL81 4.1 22.6 1.0
CB B:VAL81 4.1 20.2 1.0
CD1 C:TRP68 4.2 22.1 1.0
CD1 B:TRP68 4.2 22.4 1.0
CE2 C:TRP68 4.3 22.4 1.0
CE2 B:TRP68 4.3 22.1 1.0
CG1 C:VAL81 4.3 24.1 1.0
CG1 B:VAL81 4.3 22.6 1.0
CZ2 B:TRP68 4.5 24.8 1.0
CZ2 C:TRP68 4.5 23.1 1.0

Chlorine binding site 2 out of 2 in 8itd

Go back to Chlorine Binding Sites List in 8itd
Chlorine binding site 2 out of 2 in the Phosphoglycerate Mutase 1 Complexed with A Compound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Phosphoglycerate Mutase 1 Complexed with A Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:45.5
occ:1.00
CL C:QA3302 0.0 45.5 1.0
C01 C:QA3302 1.7 39.0 1.0
C06 C:QA3302 2.7 38.4 1.0
C02 C:QA3302 2.7 39.5 1.0
NH2 C:ARG90 3.5 32.5 1.0
O C:HOH427 3.7 34.2 1.0
CZ C:ARG90 3.9 31.0 1.0
CB C:TRP115 3.9 33.2 1.0
NH1 C:ARG90 3.9 27.6 1.0
CD1 C:TYR92 4.0 28.0 1.0
CE1 C:TYR92 4.0 30.7 1.0
C05 C:QA3302 4.0 43.6 1.0
C03 C:QA3302 4.0 46.0 1.0
O C:TRP115 4.2 34.0 1.0
O C:HOH518 4.3 41.5 1.0
CD1 C:LEU95 4.4 28.5 1.0
C C:TRP115 4.5 34.8 1.0
C04 C:QA3302 4.5 43.8 1.0
CB C:PRO123 4.5 28.6 1.0
CG C:TRP115 4.6 33.6 1.0
CG C:PRO123 4.6 30.8 1.0
CD C:PRO123 4.7 29.3 1.0
CA C:TRP115 4.7 34.5 1.0
NE C:ARG90 4.7 28.8 1.0

Reference:

L.Zhou, L.L.Jiang. Phosphoglycerate Mutase 1 Complexed with A Compound To Be Published.
Page generated: Sun Jul 13 12:29:56 2025

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