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Chlorine in PDB 8j5k: Structural Insights Into Photosystem II Supercomplex and Trimeric Fcp Antennae of A Centric Diatom Cyclotella Meneghiniana

Other elements in 8j5k:

The structure of Structural Insights Into Photosystem II Supercomplex and Trimeric Fcp Antennae of A Centric Diatom Cyclotella Meneghiniana also contains other interesting chemical elements:

Magnesium (Mg) 206 atoms
Manganese (Mn) 8 atoms
Calcium (Ca) 2 atoms
Iron (Fe) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structural Insights Into Photosystem II Supercomplex and Trimeric Fcp Antennae of A Centric Diatom Cyclotella Meneghiniana (pdb code 8j5k). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structural Insights Into Photosystem II Supercomplex and Trimeric Fcp Antennae of A Centric Diatom Cyclotella Meneghiniana, PDB code: 8j5k:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8j5k

Go back to Chlorine Binding Sites List in 8j5k
Chlorine binding site 1 out of 2 in the Structural Insights Into Photosystem II Supercomplex and Trimeric Fcp Antennae of A Centric Diatom Cyclotella Meneghiniana


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structural Insights Into Photosystem II Supercomplex and Trimeric Fcp Antennae of A Centric Diatom Cyclotella Meneghiniana within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl501

b:104.5
occ:1.00
N C:GLU354 3.0 87.4 1.0
CD2 A:PHE339 3.5 89.4 1.0
N A:ASN338 3.7 89.9 1.0
CA C:GLY353 3.7 89.8 1.0
CB C:GLU354 3.8 87.4 1.0
C C:GLY353 3.8 89.8 1.0
CA C:GLU354 3.9 87.4 1.0
CE2 A:PHE339 4.1 89.4 1.0
N A:PHE339 4.3 89.4 1.0
N C:THR355 4.3 84.0 1.0
CB A:ASN338 4.4 89.9 1.0
CA A:HIS337 4.4 88.5 1.0
CA A:ASN338 4.4 89.9 1.0
CG A:PHE339 4.5 89.4 1.0
O A:ALA336 4.5 89.2 1.0
C A:HIS337 4.5 88.5 1.0
C C:GLU354 4.6 87.4 1.0
CB A:PHE339 4.7 89.4 1.0
C A:ASN338 4.8 89.9 1.0
O C:GLY352 4.8 90.5 1.0
O C:GLY353 5.0 89.8 1.0
N C:GLY353 5.0 89.8 1.0

Chlorine binding site 2 out of 2 in 8j5k

Go back to Chlorine Binding Sites List in 8j5k
Chlorine binding site 2 out of 2 in the Structural Insights Into Photosystem II Supercomplex and Trimeric Fcp Antennae of A Centric Diatom Cyclotella Meneghiniana


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structural Insights Into Photosystem II Supercomplex and Trimeric Fcp Antennae of A Centric Diatom Cyclotella Meneghiniana within 5.0Å range:
probe atom residue distance (Å) B Occ
c:Cl501

b:104.5
occ:1.00
N c:GLU354 3.0 87.4 1.0
CD2 a:PHE339 3.5 89.4 1.0
N a:ASN338 3.7 89.9 1.0
CA c:GLY353 3.7 89.8 1.0
CB c:GLU354 3.8 87.4 1.0
C c:GLY353 3.8 89.8 1.0
CA c:GLU354 3.9 87.4 1.0
CE2 a:PHE339 4.1 89.4 1.0
N a:PHE339 4.3 89.4 1.0
N c:THR355 4.3 84.0 1.0
CB a:ASN338 4.4 89.9 1.0
CA a:HIS337 4.4 88.5 1.0
CA a:ASN338 4.4 89.9 1.0
CG a:PHE339 4.5 89.4 1.0
O a:ALA336 4.5 89.2 1.0
C a:HIS337 4.5 88.5 1.0
C c:GLU354 4.6 87.4 1.0
CB a:PHE339 4.7 89.4 1.0
C a:ASN338 4.8 89.9 1.0
O c:GLY352 4.8 90.5 1.0
O c:GLY353 5.0 89.8 1.0
N c:GLY353 5.0 89.8 1.0

Reference:

S.Zhao, L.Shen, X.Li, Q.Tao, Z.Li, C.Xu, C.Zhou, Y.Yang, M.Sang, G.Han, L.J.Yu, T.Kuang, J.R.Shen, W.Wang. Structural Insights Into Photosystem II Supercomplex and Trimeric Fcp Antennae of A Centric Diatom Cyclotella Meneghiniana. Nat Commun V. 14 8164 2023.
ISSN: ESSN 2041-1723
PubMed: 38071196
DOI: 10.1038/S41467-023-44055-8
Page generated: Sun Jul 13 12:36:00 2025

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