Chlorine in PDB 8jpr: Cryo-Em Structure of Y553C Human Clc-6

The structure of Cryo-Em Structure of Y553C Human Clc-6 also contains other interesting chemical elements:

Magnesium

(Mg)

2 atoms

The binding sites of Chlorine atom in the Cryo-Em Structure of Y553C Human Clc-6 (pdb code 8jpr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Cryo-Em Structure of Y553C Human Clc-6, PDB code: 8jpr:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the Cryo-Em Structure of Y553C Human Clc-6


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cryo-Em Structure of Y553C Human Clc-6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl901 b:19.4 occ:1.00 OG A:SER157 2.7 17.4 1.0 OH A:TYR576 2.8 16.2 1.0 N A:LEU488 3.2 18.0 1.0 CB A:SER157 3.4 17.4 1.0 CA A:GLY201 3.6 19.7 1.0 CD1 A:PHE489 3.6 18.3 1.0 CD1 A:ILE159 3.7 15.8 1.0 CA A:GLY487 3.9 18.0 1.0 CZ A:TYR576 3.9 16.2 1.0 CE1 A:PHE489 3.9 18.3 1.0 C A:GLY487 4.1 18.0 1.0 CA A:LEU488 4.1 18.0 1.0 CB A:LEU488 4.1 18.0 1.0 CL A:CL902 4.2 25.1 1.0 CE1 A:TYR576 4.3 16.2 1.0 N A:PHE489 4.4 18.3 1.0 CG1 A:ILE159 4.4 15.8 1.0 C A:LEU488 4.4 18.0 1.0 N A:GLY201 4.5 19.7 1.0 C A:GLY201 4.6 19.7 1.0 CA A:SER157 4.7 17.4 1.0 CG A:PHE489 4.8 18.3 1.0

Chlorine binding site 2 out of 4 in the Cryo-Em Structure of Y553C Human Clc-6


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cryo-Em Structure of Y553C Human Clc-6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl902 b:25.1 occ:1.00 N A:GLY201 2.6 19.7 1.0 C A:GLU200 3.2 20.8 1.0 CB A:GLU198 3.3 18.5 1.0 CB A:PHE489 3.3 18.3 1.0 CA A:GLY201 3.4 19.7 1.0 N A:GLU200 3.4 20.8 1.0 CB A:GLU200 3.4 20.8 1.0 CA A:GLU200 3.5 20.8 1.0 N A:PHE489 3.5 18.3 1.0 CA A:PHE489 4.0 18.3 1.0 N A:LEU488 4.0 18.0 1.0 CA A:GLY487 4.0 18.0 1.0 CD1 A:PHE489 4.1 18.3 1.0 CG A:PHE489 4.1 18.3 1.0 O A:GLU200 4.1 20.8 1.0 OE1 A:GLU200 4.2 20.8 1.0 CL A:CL901 4.2 19.4 1.0 N A:VAL490 4.3 19.4 1.0 C A:GLY487 4.4 18.0 1.0 C A:LYS199 4.4 20.4 1.0 N A:LYS199 4.4 20.4 1.0 C A:PHE489 4.6 18.3 1.0 CA A:GLU198 4.6 18.5 1.0 C A:GLU198 4.6 18.5 1.0 C A:LEU488 4.7 18.0 1.0 CG A:GLU200 4.7 20.8 1.0 CZ A:PHE254 4.7 16.7 1.0 C A:GLY201 4.8 19.7 1.0 CD A:GLU200 4.8 20.8 1.0 CD A:PRO202 4.9 18.0 1.0 CA A:LEU488 5.0 18.0 1.0 CG2 A:VAL490 5.0 19.4 1.0

Chlorine binding site 3 out of 4 in the Cryo-Em Structure of Y553C Human Clc-6


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Cryo-Em Structure of Y553C Human Clc-6 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl902 b:18.9 occ:1.00 OG B:SER157 2.7 17.4 1.0 OH B:TYR576 2.8 16.3 1.0 N B:LEU488 3.2 17.9 1.0 CB B:SER157 3.4 17.4 1.0 CA B:GLY201 3.6 19.9 1.0 CD1 B:PHE489 3.6 18.0 1.0 CD1 B:ILE159 3.7 15.9 1.0 CA B:GLY487 3.9 18.0 1.0 CZ B:TYR576 3.9 16.3 1.0 CE1 B:PHE489 3.9 18.0 1.0 C B:GLY487 4.1 18.0 1.0 CA B:LEU488 4.1 17.9 1.0 CB B:LEU488 4.1 17.9 1.0 CL B:CL903 4.2 25.0 1.0 CE1 B:TYR576 4.3 16.3 1.0 N B:PHE489 4.4 18.0 1.0 C B:LEU488 4.4 17.9 1.0 CG1 B:ILE159 4.4 15.9 1.0 N B:GLY201 4.5 19.9 1.0 C B:GLY201 4.6 19.9 1.0 CA B:SER157 4.7 17.4 1.0 CG B:PHE489 4.8 18.0 1.0

Chlorine binding site 4 out of 4 in the Cryo-Em Structure of Y553C Human Clc-6


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Cryo-Em Structure of Y553C Human Clc-6 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl903 b:25.0 occ:1.00 N B:GLY201 2.6 19.9 1.0 C B:GLU200 3.2 20.7 1.0 CB B:GLU198 3.3 18.5 1.0 CB B:PHE489 3.3 18.0 1.0 CA B:GLY201 3.4 19.9 1.0 N B:GLU200 3.4 20.7 1.0 CB B:GLU200 3.4 20.7 1.0 CA B:GLU200 3.5 20.7 1.0 N B:PHE489 3.5 18.0 1.0 CA B:PHE489 4.0 18.0 1.0 N B:LEU488 4.0 17.9 1.0 CA B:GLY487 4.0 18.0 1.0 CG B:PHE489 4.1 18.0 1.0 CD1 B:PHE489 4.1 18.0 1.0 O B:GLU200 4.1 20.7 1.0 OE1 B:GLU200 4.2 20.7 1.0 CL B:CL902 4.2 18.9 1.0 N B:VAL490 4.3 18.9 1.0 C B:LYS199 4.4 20.3 1.0 C B:GLY487 4.4 18.0 1.0 N B:LYS199 4.4 20.3 1.0 C B:PHE489 4.6 18.0 1.0 CA B:GLU198 4.6 18.5 1.0 C B:GLU198 4.6 18.5 1.0 C B:LEU488 4.7 17.9 1.0 CG B:GLU200 4.7 20.7 1.0 CZ B:PHE254 4.7 16.6 1.0 C B:GLY201 4.8 19.9 1.0 CD B:GLU200 4.8 20.7 1.0 CD B:PRO202 4.9 18.3 1.0 CG2 B:VAL490 5.0 18.9 1.0 CA B:LEU488 5.0 17.9 1.0

S.S.Zhang, S.S.Zhang. N/A N/A.
ISSN: ESSN 2375-2548