Atomistry » Chlorine » PDB 8oez-8oqc » 8okf
Atomistry »
  Chlorine »
    PDB 8oez-8oqc »
      8okf »

Chlorine in PDB 8okf: Wd Repeat Containing Protein 5 (WDR5)- PER2 Peptide

Enzymatic activity of Wd Repeat Containing Protein 5 (WDR5)- PER2 Peptide

All present enzymatic activity of Wd Repeat Containing Protein 5 (WDR5)- PER2 Peptide:
2.5.1.18;

Protein crystallography data

The structure of Wd Repeat Containing Protein 5 (WDR5)- PER2 Peptide, PDB code: 8okf was solved by E.Wolf, A.Boergel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.11 / 1.85
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 78.152, 78.152, 101.748, 90, 90, 90
R / Rfree (%) 16.5 / 20.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Wd Repeat Containing Protein 5 (WDR5)- PER2 Peptide (pdb code 8okf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Wd Repeat Containing Protein 5 (WDR5)- PER2 Peptide, PDB code: 8okf:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8okf

Go back to Chlorine Binding Sites List in 8okf
Chlorine binding site 1 out of 2 in the Wd Repeat Containing Protein 5 (WDR5)- PER2 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Wd Repeat Containing Protein 5 (WDR5)- PER2 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:35.6
occ:1.00
OG A:SER218 2.6 15.3 1.0
ND2 A:ASN257 2.7 14.8 1.0
N A:ILE262 2.8 15.5 1.0
O A:ILE262 2.9 15.9 1.0
CB A:ALA232 3.3 15.0 1.0
CB A:SER218 3.3 16.3 1.0
CA A:ILE262 3.5 16.4 1.0
CB A:ILE262 3.6 16.1 1.0
C A:ILE262 3.6 16.3 1.0
CG A:ASN257 3.6 17.0 1.0
O A:TYR260 3.6 16.1 1.0
OD1 A:ASN257 3.8 18.9 1.0
C A:CYS261 3.8 16.9 1.0
CA A:CYS261 4.0 16.4 1.0
CB A:PHE219 4.2 15.5 1.0
C A:SER218 4.2 15.0 1.0
O A:SER218 4.3 15.6 1.0
CG1 A:ILE262 4.3 16.4 1.0
CA A:SER218 4.3 14.7 1.0
CD2 A:LEU234 4.5 16.4 1.0
O A:HOH542 4.6 27.9 1.0
C A:TYR260 4.6 17.0 1.0
N A:PHE219 4.6 14.4 1.0
CA A:ALA232 4.7 15.6 1.0
CG2 A:ILE262 4.7 18.1 1.0
N A:CYS261 4.8 15.7 1.0
C A:ALA232 4.9 15.2 1.0
N A:PHE263 4.9 15.6 1.0
CB A:ASN257 5.0 17.5 1.0

Chlorine binding site 2 out of 2 in 8okf

Go back to Chlorine Binding Sites List in 8okf
Chlorine binding site 2 out of 2 in the Wd Repeat Containing Protein 5 (WDR5)- PER2 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Wd Repeat Containing Protein 5 (WDR5)- PER2 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:36.2
occ:1.00
N A:PHE79 3.0 16.1 1.0
CB A:PHE79 3.6 18.1 1.0
CA A:LYS78 3.8 19.1 1.0
C A:LYS78 3.9 18.0 1.0
CA A:PHE79 3.9 17.3 1.0
O A:GLY77 4.3 23.1 1.0
CB A:LYS78 4.6 22.5 1.0
O A:HOH579 4.7 17.7 1.0
O A:PHE79 4.8 15.1 1.0
N A:LYS78 4.9 18.6 1.0
C A:PHE79 4.9 17.7 1.0
CG A:PHE79 5.0 18.5 1.0
C A:GLY77 5.0 21.5 1.0

Reference:

E.Wolf, A.Boergel, A.Rawleigh, M.Conrady, F.Hof, K.Ricci, S.Brown. A Structural Competition Involving WDR5 Times Circadian Oscillations To Be Published.
Page generated: Sun Jul 13 12:49:50 2025

Last articles

Mg in 9FX7
Mg in 9FX6
Mg in 9FWJ
Mg in 9FWA
Mg in 9FVJ
Mg in 9FVT
Mg in 9FTF
Mg in 9FU0
Mg in 9FSS
Mg in 9FS6
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy