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Chlorine in PDB 8pih: Structure of Api M1 in Complex with Two Nanobodies

Enzymatic activity of Structure of Api M1 in Complex with Two Nanobodies

All present enzymatic activity of Structure of Api M1 in Complex with Two Nanobodies:
3.1.1.4;

Protein crystallography data

The structure of Structure of Api M1 in Complex with Two Nanobodies, PDB code: 8pih was solved by J.B.Aagaard, R.Gandini, E.Spillner, M.Miehe, G.R.Andersen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.02 / 1.76
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 133.96, 51.33, 73.25, 90, 120.78, 90
R / Rfree (%) 17.1 / 20.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Api M1 in Complex with Two Nanobodies (pdb code 8pih). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Api M1 in Complex with Two Nanobodies, PDB code: 8pih:

Chlorine binding site 1 out of 1 in 8pih

Go back to Chlorine Binding Sites List in 8pih
Chlorine binding site 1 out of 1 in the Structure of Api M1 in Complex with Two Nanobodies


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Api M1 in Complex with Two Nanobodies within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:39.7
occ:1.00
HE2 A:HIS56 2.1 53.8 1.0
HE A:ARG58 2.3 35.5 1.0
HA A:THR93 2.6 31.4 1.0
H A:LYS94 2.6 30.5 1.0
NE2 A:HIS56 2.9 44.8 1.0
HG2 A:ARG58 3.0 32.9 1.0
HH21 A:ARG58 3.1 39.0 1.0
NE A:ARG58 3.1 29.5 1.0
HG22 A:THR93 3.1 42.4 1.0
N A:LYS94 3.4 25.4 1.0
O A:HOH352 3.4 47.7 1.0
CA A:THR93 3.5 26.1 1.0
HD2 A:HIS56 3.7 47.1 1.0
CD2 A:HIS56 3.7 39.2 1.0
CG A:ARG58 3.8 27.3 1.0
NH2 A:ARG58 3.8 32.4 1.0
HB A:THR93 3.9 41.3 1.0
CG2 A:THR93 3.9 35.2 1.0
CZ A:ARG58 3.9 29.7 1.0
HH21 C:ARG104 3.9 40.6 1.0
O A:LYS94 3.9 26.3 1.0
C A:THR93 4.0 32.2 1.0
CE1 A:HIS56 4.0 40.5 1.0
HG3 A:ARG58 4.0 32.9 1.0
CD A:ARG58 4.0 29.2 1.0
CB A:THR93 4.0 34.4 1.0
O A:ASP92 4.0 39.5 1.0
HE C:ARG104 4.2 44.5 1.0
HE1 A:HIS56 4.2 48.7 1.0
HG23 A:THR93 4.3 42.4 1.0
HD3 A:ARG58 4.3 35.1 1.0
NH2 C:ARG104 4.3 33.8 1.0
HB2 A:LYS94 4.4 28.8 1.0
CA A:LYS94 4.5 21.4 1.0
N A:THR93 4.5 27.7 1.0
NE C:ARG104 4.5 37.0 1.0
HH22 A:ARG58 4.6 39.0 1.0
C A:ASP92 4.6 36.6 1.0
HG21 A:THR93 4.7 42.4 1.0
C A:LYS94 4.7 25.2 1.0
CZ C:ARG104 4.7 34.3 1.0
HH22 C:ARG104 4.7 40.6 1.0
HA A:ARG58 4.8 28.5 1.0
HD2 A:ARG58 4.8 35.1 1.0
HB2 A:ALA54 4.8 31.2 1.0
HD23 A:LEU90 4.8 51.4 1.0
O A:HOH308 4.8 25.2 1.0
HB1 A:ALA54 4.8 31.2 1.0
HD11 A:LEU131 4.9 33.6 1.0
CG A:HIS56 4.9 35.9 1.0
CB A:LYS94 5.0 23.9 1.0

Reference:

J.B.Aagaard, J.B.Aagaard, R.Gandini, E.Spillner, M.Miehe, G.R.Andersen. N/A N/A.
Page generated: Sun Jul 13 13:09:31 2025

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