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Chlorine in PDB 8pnw: Crystal Structure of D-Amino Acid Aminotransferase From Blastococcus Saxobsidens in Holo Form with Plp

Protein crystallography data

The structure of Crystal Structure of D-Amino Acid Aminotransferase From Blastococcus Saxobsidens in Holo Form with Plp, PDB code: 8pnw was solved by I.O.Matyuta, K.M.Boyko, A.Y.Nikolaeva, S.A.Shilova, V.O.Popov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.97 / 1.70
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 105.935, 105.935, 51.324, 90, 90, 120
R / Rfree (%) 17.1 / 19.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of D-Amino Acid Aminotransferase From Blastococcus Saxobsidens in Holo Form with Plp (pdb code 8pnw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of D-Amino Acid Aminotransferase From Blastococcus Saxobsidens in Holo Form with Plp, PDB code: 8pnw:

Chlorine binding site 1 out of 1 in 8pnw

Go back to Chlorine Binding Sites List in 8pnw
Chlorine binding site 1 out of 1 in the Crystal Structure of D-Amino Acid Aminotransferase From Blastococcus Saxobsidens in Holo Form with Plp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of D-Amino Acid Aminotransferase From Blastococcus Saxobsidens in Holo Form with Plp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:27.5
occ:1.00
O A:HOH467 3.0 36.3 1.0
O A:HOH412 3.2 23.2 0.7
CE2 A:PHE39 3.6 19.7 1.0
CG2 A:THR191 3.8 20.7 1.0
CZ A:PHE39 3.8 19.6 1.0
CB A:THR191 3.9 19.7 1.0
NH1 A:ARG96 4.0 26.6 0.3
CB A:SER41 4.2 23.9 1.0
NZ A:LYS155 4.2 19.9 1.0
OG A:SER41 4.3 28.6 1.0
O A:HOH581 4.4 21.4 1.0
C4A A:PLP301 4.7 17.2 1.0
CE A:LYS155 4.7 19.0 1.0
OG1 A:THR191 4.7 20.9 1.0
O A:THR191 4.8 18.4 1.0
CA A:THR191 4.8 16.9 1.0
CD2 A:PHE39 4.9 18.9 1.0

Reference:

S.A.Shilova, A.Y.Nikolaeva, I.O.Matyuta, K.M.Boyko, V.O.Popov, E.Y.Bezsudnova. Structural Determinants of Dual Substrate Recognition in the Transaminase From Blastococcus Saxobsidens Specific to D-Amino Acids and R-Amines To Be Published.
Page generated: Sun Jul 13 13:12:08 2025

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