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Chlorine in PDB 8prj: The Structure of V31BAGEL8

Protein crystallography data

The structure of The Structure of V31BAGEL8, PDB code: 8prj was solved by L.Vandebroek, A.R.D.Voet, X.Y.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 51.02 / 1.40
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 94.254, 72.612, 55.904, 90, 114.12, 90
R / Rfree (%) 13.5 / 16.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Structure of V31BAGEL8 (pdb code 8prj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Structure of V31BAGEL8, PDB code: 8prj:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8prj

Go back to Chlorine Binding Sites List in 8prj
Chlorine binding site 1 out of 2 in the The Structure of V31BAGEL8


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of V31BAGEL8 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:15.8
occ:1.00
O A:HOH1068 3.1 27.7 1.0
O A:HOH967 3.2 25.8 1.0
O A:HOH888 3.2 18.5 1.0
ND2 A:ASN20 3.3 15.5 1.0
ND2 A:ASN18 3.4 14.5 1.0
CD A:LYS22 3.9 14.8 1.0
CB A:LYS22 4.0 10.9 1.0
OD1 A:ASN20 4.0 13.8 1.0
CG A:ASN20 4.1 13.8 1.0
O A:HOH855 4.4 19.3 1.0
CG A:ASN18 4.4 12.4 1.0
CG A:LYS22 4.5 13.6 1.0
CB A:ASN18 4.7 11.6 1.0
O A:HOH781 4.8 11.3 1.0

Chlorine binding site 2 out of 2 in 8prj

Go back to Chlorine Binding Sites List in 8prj
Chlorine binding site 2 out of 2 in the The Structure of V31BAGEL8


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Structure of V31BAGEL8 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:13.2
occ:1.00
NE2 A:HIS194 3.2 7.6 0.5
NE2 A:HIS114 3.2 8.9 0.5
NE2 A:HIS274 3.2 6.9 0.5
NE2 A:HIS34 3.2 8.0 0.5
NE2 A:HIS74 3.2 12.3 0.4
NE2 A:HIS314 3.3 10.9 0.4
NE2 A:HIS234 3.3 11.7 0.4
NE2 A:HIS154 3.4 18.1 0.4
O A:HOH1056 3.5 28.6 1.0
CE1 A:HIS194 3.9 8.6 0.5
CE1 A:HIS74 3.9 12.5 0.4
CE1 A:HIS154 3.9 17.7 0.4
CE1 A:HIS234 3.9 11.7 0.4
CE1 A:HIS34 4.0 8.8 0.5
CE1 A:HIS274 4.0 8.3 0.5
CE1 A:HIS314 4.0 12.0 0.4
CE1 A:HIS114 4.0 9.0 0.5
O A:HOH595 4.1 8.1 1.0
O A:HOH596 4.1 8.0 1.0
O A:HOH582 4.1 8.9 1.0
O A:HOH609 4.1 9.1 1.0
O A:HOH576 4.1 7.9 1.0
O A:HOH612 4.1 8.3 1.0
O A:HOH605 4.1 8.3 1.0
O A:HOH604 4.2 8.5 1.0
CD2 A:HIS114 4.3 8.6 0.5
CD2 A:HIS274 4.3 7.4 0.5
CD2 A:HIS34 4.3 7.4 0.5
CD2 A:HIS194 4.4 8.0 0.5
CD2 A:HIS74 4.4 11.8 0.4
CD2 A:HIS314 4.4 10.8 0.4
CD2 A:HIS234 4.4 10.7 0.4
CD2 A:HIS154 4.5 17.1 0.4

Reference:

L.Vandebroek, A.R.D.Voet, X.Y.Lee. The Structure of V13BAGEL8 To Be Published.
Page generated: Sun Jul 13 13:15:04 2025

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