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Chlorine in PDB 8pxz: Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Natural Substrate

Protein crystallography data

The structure of Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Natural Substrate, PDB code: 8pxz was solved by M.De Munnik, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.18 / 1.98
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.12, 95.83, 59.23, 90, 90, 90
R / Rfree (%) 18 / 22.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Natural Substrate (pdb code 8pxz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Natural Substrate, PDB code: 8pxz:

Chlorine binding site 1 out of 1 in 8pxz

Go back to Chlorine Binding Sites List in 8pxz
Chlorine binding site 1 out of 1 in the Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Natural Substrate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Natural Substrate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl605

b:46.9
occ:1.00
ND2 A:ASN97 3.2 46.7 1.0
O A:HOH972 3.2 48.9 1.0
ND2 A:ASN95 3.4 42.1 1.0
NH2 A:ARG122 3.5 39.9 1.0
CB A:ASN97 3.6 41.4 1.0
CD A:ARG99 3.8 71.0 1.0
NH1 A:ARG122 3.8 40.2 1.0
NE A:ARG99 3.8 67.5 1.0
CG A:ASN97 3.9 48.2 1.0
CZ A:ARG122 4.1 38.9 1.0
CG A:ASN95 4.1 40.4 1.0
OD1 A:ASN95 4.2 37.1 1.0
CG A:ARG99 4.2 62.0 1.0
O A:HOH1015 4.7 49.5 1.0
CB A:ARG99 4.9 46.0 1.0
CA A:ASN97 5.0 46.5 1.0

Reference:

M.De Munnik, C.J.Schofield. Crystal Structure of the Transpeptidase LDTMT2 From Mycobacterium Tuberculosis in Complex with Natural Substrate To Be Published.
Page generated: Sun Jul 13 13:18:49 2025

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