Chlorine in PDB 8q4h: A Membrane-Bound Menaquinol:Organohalide Oxidoreductase Complex Rdh Complex

The structure of A Membrane-Bound Menaquinol:Organohalide Oxidoreductase Complex Rdh Complex also contains other interesting chemical elements:

Iron	(Fe)	16 atoms
Cobalt	(Co)	2 atoms

The binding sites of Chlorine atom in the A Membrane-Bound Menaquinol:Organohalide Oxidoreductase Complex Rdh Complex (pdb code 8q4h). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the A Membrane-Bound Menaquinol:Organohalide Oxidoreductase Complex Rdh Complex, PDB code: 8q4h:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the A Membrane-Bound Menaquinol:Organohalide Oxidoreductase Complex Rdh Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of A Membrane-Bound Menaquinol:Organohalide Oxidoreductase Complex Rdh Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl601 b:0.5 occ:1.00 CL1 A:JYF601 0.0 0.5 1.0 C2 A:JYF601 1.7 0.5 1.0 H2 A:JYF601 2.4 0.5 1.0 C1 A:JYF601 2.9 0.5 1.0 CL2 A:JYF601 3.4 0.5 1.0 CH2 A:TRP157 3.5 19.1 1.0 H1 A:JYF601 3.7 0.5 1.0 CZ3 A:TRP471 3.7 25.6 1.0 CB A:ALA168 3.9 23.5 1.0 CH2 A:TRP471 4.2 25.6 1.0 CG A:PRO477 4.2 23.4 1.0 CZ2 A:TRP157 4.2 19.1 1.0 CZ3 A:TRP157 4.3 19.1 1.0 CE2 A:PHE70 4.3 31.4 1.0 CZ A:PHE70 4.3 31.4 1.0 CZ A:PHE127 4.5 30.8 1.0 CE2 A:TYR337 4.6 17.8 1.0 CE2 A:PHE127 4.7 30.8 1.0 CE3 A:TRP471 4.7 25.6 1.0 CE1 A:PHE166 4.9 24.2 1.0

Chlorine binding site 2 out of 4 in the A Membrane-Bound Menaquinol:Organohalide Oxidoreductase Complex Rdh Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of A Membrane-Bound Menaquinol:Organohalide Oxidoreductase Complex Rdh Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl601 b:0.5 occ:1.00 CL2 A:JYF601 0.0 0.5 1.0 C1 A:JYF601 1.7 0.5 1.0 H1 A:JYF601 2.3 0.5 1.0 C2 A:JYF601 2.9 0.5 1.0 OH A:TYR337 3.1 17.8 1.0 CE2 A:PHE70 3.4 31.4 1.0 CL1 A:JYF601 3.4 0.5 1.0 CO A:COB602 3.6 51.1 1.0 H2 A:JYF601 3.7 0.5 1.0 CH2 A:TRP471 3.8 25.6 1.0 CZ A:TYR337 4.1 17.8 1.0 CZ A:PHE70 4.1 31.4 1.0 O A:ALA168 4.2 23.5 1.0 N22 A:COB602 4.2 51.2 1.0 CZ3 A:TRP471 4.2 25.6 1.0 N23 A:COB602 4.3 50.3 1.0 CD2 A:PHE70 4.3 31.4 1.0 N24 A:COB602 4.3 50.9 1.0 CE2 A:TYR337 4.4 17.8 1.0 ND2 A:ASN363 4.4 23.0 1.0 O39 A:COB602 4.6 51.7 1.0 CB A:ALA168 4.7 23.5 1.0 C15 A:COB602 4.7 50.1 1.0 C16 A:COB602 4.7 50.5 1.0 C14 A:COB602 4.7 50.3 1.0 NH1 A:ARG396 4.7 15.4 1.0 C11 A:COB602 4.8 50.3 1.0 C6 A:COB602 4.8 51.6 1.0 C9 A:COB602 4.8 51.2 1.0 C A:ALA168 4.8 23.5 1.0 N21 A:COB602 4.9 51.7 1.0 CZ2 A:TRP471 5.0 25.6 1.0 C10 A:COB602 5.0 50.8 1.0

Chlorine binding site 3 out of 4 in the A Membrane-Bound Menaquinol:Organohalide Oxidoreductase Complex Rdh Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of A Membrane-Bound Menaquinol:Organohalide Oxidoreductase Complex Rdh Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl601 b:0.5 occ:1.00 CL1 B:JYF601 0.0 0.5 1.0 C2 B:JYF601 1.7 0.5 1.0 H2 B:JYF601 2.3 0.5 1.0 C1 B:JYF601 2.9 0.5 1.0 CE2 B:PHE70 3.3 31.0 1.0 OH B:TYR337 3.3 17.0 1.0 CL2 B:JYF601 3.6 0.5 1.0 H1 B:JYF601 3.7 0.5 1.0 CO B:COB602 3.7 51.1 1.0 CH2 B:TRP471 3.8 25.6 1.0 CD2 B:PHE70 4.1 31.0 1.0 CZ3 B:TRP471 4.1 25.6 1.0 CZ B:PHE70 4.1 31.0 1.0 O B:ALA168 4.2 23.4 1.0 CZ B:TYR337 4.3 17.0 1.0 N23 B:COB602 4.3 50.3 1.0 N22 B:COB602 4.3 51.2 1.0 O39 B:COB602 4.4 51.7 1.0 N24 B:COB602 4.4 50.9 1.0 ND2 B:ASN363 4.5 23.1 1.0 CE2 B:TYR337 4.5 17.0 1.0 C15 B:COB602 4.7 50.1 1.0 CB B:ALA168 4.7 23.4 1.0 C14 B:COB602 4.7 50.3 1.0 C16 B:COB602 4.7 50.5 1.0 NH1 B:ARG396 4.7 15.2 1.0 C B:ALA168 4.8 23.4 1.0 C11 B:COB602 4.8 50.3 1.0 C9 B:COB602 4.9 51.2 1.0 C10 B:COB602 4.9 50.8 1.0 C6 B:COB602 5.0 51.6 1.0 CZ2 B:TRP471 5.0 25.6 1.0

Chlorine binding site 4 out of 4 in the A Membrane-Bound Menaquinol:Organohalide Oxidoreductase Complex Rdh Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of A Membrane-Bound Menaquinol:Organohalide Oxidoreductase Complex Rdh Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl601 b:0.5 occ:1.00 CL2 B:JYF601 0.0 0.5 1.0 C1 B:JYF601 1.7 0.5 1.0 H1 B:JYF601 2.3 0.5 1.0 C2 B:JYF601 2.9 0.5 1.0 CL1 B:JYF601 3.6 0.5 1.0 H2 B:JYF601 3.7 0.5 1.0 CB B:ALA168 3.7 23.4 1.0 CZ3 B:TRP471 3.8 25.6 1.0 CH2 B:TRP157 3.8 19.1 1.0 CE2 B:PHE70 4.0 31.0 1.0 CZ B:PHE70 4.1 31.0 1.0 CZ B:PHE127 4.3 30.8 1.0 CG B:PRO477 4.5 23.3 1.0 CH2 B:TRP471 4.5 25.6 1.0 CZ3 B:TRP157 4.5 19.1 1.0 CE2 B:PHE127 4.5 30.8 1.0 CG2 B:THR169 4.6 27.6 1.0 CZ2 B:TRP157 4.6 19.1 1.0 CE3 B:TRP471 4.8 25.6 1.0 CZ B:PHE166 4.9 24.3 1.0 CA B:ALA168 4.9 23.4 1.0 CE2 B:TYR337 4.9 17.0 1.0 C B:ALA168 4.9 23.4 1.0 CD2 B:PHE70 5.0 31.0 1.0

N.Dongchun, B.Ekundayo, S.Henning, M.Julien, C.Holliger, L.Cimmino. Structure of A Membrane-Bound Menaquinol:Organohalide Oxidoreductase To Be Published.